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Posts by BrunetLab

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Life Science Research Professional 1 in School of Medicine, Stanford, California, United States Stanford University is seeking a Life Science Research Professional 1 to study the mechanisms of aging and rejuvenation, particularly in a variety of....

Interested in aging and rejuvenation?

We have a new Research Assistant position to understand aging at the cellular level!!

Come join our team!!! 😎

careersearch.stanford.edu/jobs/life-sc...

1 week ago 23 14 1 0
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Whole-embryo spatial transcriptomics at subcellular resolution from gastrulation to organogenesis Gene expression patterns underlie development, but their systematic detection in whole embryos has remained elusive. We introduce a whole-embryo imaging platform using multiplexed error-robust fluores...

Very happy to see this out. πŸ‘ @yinanwan.bsky.social
Bogdan Bintu and team.
Whole-embryo spatial transcriptomics at subcellular resolution from gastrulation to organogenesis | free link Science www.science.org/eprint/5MHTM...

1 month ago 181 77 6 8
CryoET and colored segmentation of TMEM106B fibrils protruding from within a broken lysosome in post-mortem FTLD-GRN brain.

CryoET and colored segmentation of TMEM106B fibrils protruding from within a broken lysosome in post-mortem FTLD-GRN brain.

Excited to share a pre-print from a collaboration between my lab at NIH, Len Petrucelli's lab at University of Miami, and Shyamal Mosalaganti's lab at University of Michigan.

3 weeks ago 33 9 4 0
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Spontaneous behavior is a succession of self-directed tasks Weinreb et al. reveal a hierarchy of timescales in mouse behavior, including low-level syllables and high-level behavioral states. States and syllables are encoded in different brain areas. Prefrontal...

Have you ever wondered why mice do what they do when they are free to do whatever they want? Check out our latest (and this slightly delayed thread about our recent paper, led by Caleb Weinreb and friends...) www.cell.com/neuron/fullt...

3 weeks ago 132 48 2 0

So very sorry for your loss, Rebecca.

3 weeks ago 1 0 0 0
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Estropausal gut microbiota transplant improves measures of ovarian function in adult mice - Nature Aging To investigate the link between the gut microbiome and ovarian health, here the authors transplant gut microbiota from estropausal female mice to young adult female mice. Microbial transplantation imp...

Online now! A new study shows transplanting gut microbiota from estropausal female mice to young adult female mice improves ovarian hormone profiles, follicle metrics, and fertility-related outcomes. @bbparis1984.bsky.social
doi.org/10.1038/s435...

1 month ago 4 2 0 0
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Aging may feel gradual… but what if it’s not?
In our recent paper, we tracked fish continuously from puberty until death.
This gave us a unique view of how aging unfolds across the adult lifespan.
🧡

1 month ago 149 55 3 5

Great work from Claire, Ravi, and the whole team– the initial lifelong continuous screen of behaving vertebrates provided a wealth of ideas on progression/staging of brain function across lifespan. Behavior is unmatched as a noninvasive quantitative readout of brain function (and, one that matters).

1 month ago 50 14 1 0
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Lifelong behavioral screen reveals an architecture of vertebrate aging Mapping behavior of individual vertebrate animals across lifespan could provide an unprecedented view into the lifelong process of aging. We created a platform for high-resolution continuous behaviora...

Lifelong behavioral screen reveals an architecture of vertebrate aging | Science
Was a wonderful collaboration with @clairebedbrook.bsky.social, Libby Zhang, Scott Linderman, @brunetlab.bsky.social & @deisseroth.bsky.social
www.science.org/doi/10.1126/...

1 month ago 21 3 1 0
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Youthful antics predict lifespan? Using machine learning & continuous recordings of #killifish behavior from adolescence until death, @brunetlab.bsky.social & @deisseroth.bsky.social find early-life behavior predicted future lifespan! Now published @science.org: www.science.org/doi/10.1126/... πŸ§ͺ 1/2

1 month ago 56 21 3 2
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Lifelong behavioral screen reveals an architecture of vertebrate aging Mapping behavior of individual vertebrate animals across lifespan could provide an unprecedented view into the lifelong process of aging. We created a platform for high-resolution continuous behaviora...

πŸ§ͺ New from incoming LSI faculty Claire Bedbrook & Ravi Nath, from @brunetlab.bsky.social's lab: www.science.org/doi/10.1126/... πŸ§ͺ

1 month ago 8 1 0 0
Ravi Nath and Claire Bedbrook stand in an aisle of shelves filled with fish tanks. Photo by Andrew Brodhead.

Ravi Nath and Claire Bedbrook stand in an aisle of shelves filled with fish tanks. Photo by Andrew Brodhead.

On today's podcast, we talk with neuroscientists Claire Bedbrook and Ravi Nath about their new study, which found that an animal's lifespan can be predicted surprisingly early by observing its behavior. @brunetlab.bsky.social @deisseroth.bsky.social

πŸ”— neuroscience.stanford.edu/news/why-do-...

1 month ago 14 4 0 1
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Multi-tissue transcriptomic aging atlas reveals predictive aging biomarkers in the killifish - Nature Aging Characterizing molecular aging features is crucial for understanding systemic and local factors contributing to the aging process. Here Costa, Chen et al. performed RNA sequencing on 13 tissues across...

Multi-organ transcriptomic aging atlas in killifish, with both males and females! 🐟🐟🐟

Huge congratulations to Emma, Jing, Tony and the entire team!! ✨⭐

@emkcosta.bsky.social
@jingxunchen.bsky.social
Wyss-Coray lab!

www.nature.com/articles/s43...

1 month ago 17 6 0 0
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Multi-tissue transcriptomic aging atlas reveals predictive aging biomarkers in the killifish - Nature Aging Characterizing molecular aging features is crucial for understanding systemic and local factors contributing to the aging process. Here Costa, Chen et al. performed RNA sequencing on 13 tissues across...

Online now! Costa, Chen et al. performed RNA-seq on 13 tissues, six ages in male and female African turquoise killifish. The Killifish Aging Atlas provides a comprehensive resource for aging studies. @emkcosta.bsky.social @jingxunchen.bsky.social @brunetlab.bsky.social
doi.org/10.1038/s435...

1 month ago 5 4 0 0

Congratulations to the entire team and a huge thank you to all collaborators! Thank you so much for the support of the Knight Initiative for Brain Resilience at Stanford for this project! πŸ™

1 month ago 2 0 0 0

We are excited by this study because it provides the potential for 'immunotherapies' for the old brain.

Of course, a lot remains to be done, including identifying additional efficient 'immunotherapies' that can rejuvenate old brain function.

1 month ago 3 0 1 0
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More broadly, this IL-10 variant has beneficial effects on cognitive behavior (done with Saul Villeda's lab) in old mice.

This suggests that quenching inflammation in old brains can boost cognitive function in old individuals

1 month ago 3 0 1 0
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Importantly, this IL-10 variant decreases inflammation in both neurogenic niches in the adult brain – the subventricular zone and the dentate gyrus.

The IL-10 variant has a small beneficial effect on the production of new neurons from the subventricular zone neurogenic niche in old individuals.

1 month ago 2 0 1 0
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We found that this engineered IL-10 variant reduces inflammation in microglia (and does not trigger strong T cell activation) in old brains.

1 month ago 2 0 1 0
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We chose IL-10 because we noticed that the IL-10 pathway is going down with age, notably in microglia.

We infused this engineered IL-10 variant that is more targeted toward anti-inflammation into old brains and examined its impact using a variety of assays.

1 month ago 3 0 1 0
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So could age-dependent inflammation be quenched to counter brain aging?

For this, we used an engineered cytokine (IL-10) which has anti-inflammation properties and was generated by Bobby Saxton in the Garcia lab.

1 month ago 3 0 1 0
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We found that infusing this checkpoint inhibitor into the brain triggers massive inflammation of microglia.

This suggests that reversing T cell exhaustion actually augments inflammation in the aged brain (which is already more inflamed than the young brain), which is likely detrimental.

1 month ago 2 0 1 0
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We wondered what would happen if we infused a checkpoint inhibitor into the aged brain to reverse this T cell exhaustion.

We used a potent checkpoint inhibitor (RIPR-PD1) engineered by Ricardo Fernandes in the Garcia lab, and we examined its effect on a key brain region – the subventricular zone.

1 month ago 2 0 1 0
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We and others had previously observed that cytotoxic T cells strikingly accumulate in the old brain.

Characterizing T cells from aged brains, we noticed that some of them have hallmarks of memory T cells whereas others have hallmarks of exhausted T cells, such as the checkpoint protein PD1.

1 month ago 2 0 1 0

Brain aging is associated with cognitive decline and a dramatic increase in neurodegenerative diseases, including Alzheimer's disease.

Could 'immunotherapies' – strategies based on the immune system – counter brain aging?

1 month ago 2 0 1 0
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Targeting immune cells in the aged brain reveals that engineered cytokine IL-10 enhances neurogenesis and improves cognition Immune cells populate the old brain, but whether they can be specifically targeted to improve brain function in older individuals remains unclear. Navarro Negredo et al. dissect how aging impacts brai...

Excited to share our new study using engineered immune proteins to quench inflammation in aged brains!!

Congratulations to Paloma Navarro and the entire team!

Fantastic collaboration with Chris Garcia's lab, Tony Wyss-Coray's lab, and Saul Villeda's lab!

www.cell.com/immunity/ful...

1 month ago 57 19 1 0
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We have posted a Research Assistant (LSRP1) position to work on aging and 'rejuvenation' using mouse models!! 🐭

careersearch.stanford.edu/jobs/life-sc...

Apply and join our awesome lab!! (please share) 😎

2 months ago 14 11 0 0
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Life Science Research Professional 1 in School of Medicine, Stanford, California, United States The Brunet lab in the Department of Genetics at Stanford University (https://web.stanford.edu/group/brunet/) is seeking an independent and motivated.....

Interested in the mechanisms of aging and 'rejuvenation'?

Our lab at Stanford has a Research Assistant/Lab manager position open!!

Apply and join our awesome team! 😎 (please share)

careersearch.stanford.edu/jobs/life-sc...

2 months ago 12 15 0 1
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#1211 Coleen Murphy - How We Age: The Science of Longevity
#1211 Coleen Murphy - How We Age: The Science of Longevity YouTube video by The Dissenter

New episode (1211), with Dr. Coleen Murphy (@ctmurphy1.bsky.social). We talk about her book, How We Age: The Science of Longevity. #Biology #Science

YouTube: youtu.be/Fy22JhtHhdU
Podcast: bit.ly/4a1fCh8

2 months ago 9 3 0 0
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We are hiring!! Lab Assistant II position to work with the killifish! 🐟🐟🐟 This is an amazing model to study aging and 'suspended animation'

careersearch.stanford.edu/jobs/lab-ass...

Come and join our fantastic team at Stanford!! 🀩 Please share!

2 months ago 14 9 1 1