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Posts by Roberto Toro

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You've never seen human anatomy like this before.

Using a particle accelerator, the Human Organ Atlas is producing 3D scans of our organs in unprecedented detail! You can look through different layers of tissue and even zoom in on the cells for the heart, lungs, eyes, kidneys, and more.

19 hours ago 301 75 9 12

A real computational tour de force by @ericneiva.bsky.social, carried out as Marie SkƂodowska-Curie postdoctoral fellow in the team, now published in the Journal of Computational Physics: urlr.me/AuzK86

Congratulations, Eric!

@cnrsbiologie.bsky.social
Grateful to @ec.europa.eu for funding support

1 day ago 14 3 0 0
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The Entire Archives of Radical Philosophy Go Online: Read Essays by Michel Foucault, Alain Badiou, Judith Butler & More (1972–2022) On a seemingly daily basis, we see attacks against the intellectual culture of the academic humanities, which, since the 1960s, have opened up spaces for leftists to develop critical theories of all k...

The Entire Archives of Radical Philosophy Go Online: Read Essays by Michel Foucault, Alain Badiou, Judith Butler & More (1972–2022)

2 days ago 126 61 2 1
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New preprint with Rafael Leite, Sandro Reia and Paulo Campos

Cumulative Cultural Evolution in Structured Populations

www.biorxiv.org/content/10.6...

In which we take an old model of cumulative cultural evolution of mine and see what happens if you add social networks

4 days ago 31 13 2 0
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« La France est en train de dĂ©crocher » : le cri d’alarme des chercheurs du CNRS aprĂšs les 500 millions de coupes budgĂ©taires Un appel des directeurs de laboratoires et des prĂ©sidents des diffĂ©rentes instances du CNRS va ĂȘtre lancĂ© pour dĂ©noncer les coupes du gouvernement dans le budget du premier organisme de recherche fran...

« La France est en train de dĂ©crocher » : le cri d’alarme des chercheurs du CNRS aprĂšs les 500 millions de coupes budgĂ©taires.
www.challenges.fr/politique/la...

3 days ago 59 48 4 1
Abstract: Under the banner of progress, products have been uncritically adopted or
even imposed on users — in past centuries with tobacco and combustion engines, and in
the 21st with social media. For these collective blunders, we now regret our involvement or
apathy as scientists, and society struggles to put the genie back in the bottle. Currently, we
are similarly entangled with artificial intelligence (AI) technology. For example, software updates are rolled out seamlessly and non-consensually, Microsoft Office is bundled with chatbots, and we, our students, and our employers have had no say, as it is not
considered a valid position to reject AI technologies in our teaching and research. This
is why in June 2025, we co-authored an Open Letter calling on our employers to reverse
and rethink their stance on uncritically adopting AI technologies. In this position piece,
we expound on why universities must take their role seriously toa) counter the technology
industry’s marketing, hype, and harm; and to b) safeguard higher education, critical
thinking, expertise, academic freedom, and scientific integrity. We include pointers to
relevant work to further inform our colleagues.

Abstract: Under the banner of progress, products have been uncritically adopted or even imposed on users — in past centuries with tobacco and combustion engines, and in the 21st with social media. For these collective blunders, we now regret our involvement or apathy as scientists, and society struggles to put the genie back in the bottle. Currently, we are similarly entangled with artificial intelligence (AI) technology. For example, software updates are rolled out seamlessly and non-consensually, Microsoft Office is bundled with chatbots, and we, our students, and our employers have had no say, as it is not considered a valid position to reject AI technologies in our teaching and research. This is why in June 2025, we co-authored an Open Letter calling on our employers to reverse and rethink their stance on uncritically adopting AI technologies. In this position piece, we expound on why universities must take their role seriously toa) counter the technology industry’s marketing, hype, and harm; and to b) safeguard higher education, critical thinking, expertise, academic freedom, and scientific integrity. We include pointers to relevant work to further inform our colleagues.

Figure 1. A cartoon set theoretic view on various terms (see Table 1) used when discussing the superset AI
(black outline, hatched background): LLMs are in orange; ANNs are in magenta; generative models are
in blue; and finally, chatbots are in green. Where these intersect, the colours reflect that, e.g. generative adversarial network (GAN) and Boltzmann machine (BM) models are in the purple subset because they are
both generative and ANNs. In the case of proprietary closed source models, e.g. OpenAI’s ChatGPT and
Apple’s Siri, we cannot verify their implementation and so academics can only make educated guesses (cf.
Dingemanse 2025). Undefined terms used above: BERT (Devlin et al. 2019); AlexNet (Krizhevsky et al.
2017); A.L.I.C.E. (Wallace 2009); ELIZA (Weizenbaum 1966); Jabberwacky (Twist 2003); linear discriminant analysis (LDA); quadratic discriminant analysis (QDA).

Figure 1. A cartoon set theoretic view on various terms (see Table 1) used when discussing the superset AI (black outline, hatched background): LLMs are in orange; ANNs are in magenta; generative models are in blue; and finally, chatbots are in green. Where these intersect, the colours reflect that, e.g. generative adversarial network (GAN) and Boltzmann machine (BM) models are in the purple subset because they are both generative and ANNs. In the case of proprietary closed source models, e.g. OpenAI’s ChatGPT and Apple’s Siri, we cannot verify their implementation and so academics can only make educated guesses (cf. Dingemanse 2025). Undefined terms used above: BERT (Devlin et al. 2019); AlexNet (Krizhevsky et al. 2017); A.L.I.C.E. (Wallace 2009); ELIZA (Weizenbaum 1966); Jabberwacky (Twist 2003); linear discriminant analysis (LDA); quadratic discriminant analysis (QDA).

Table 1. Below some of the typical terminological disarray is untangled. Importantly, none of these terms
are orthogonal nor do they exclusively pick out the types of products we may wish to critique or proscribe.

Table 1. Below some of the typical terminological disarray is untangled. Importantly, none of these terms are orthogonal nor do they exclusively pick out the types of products we may wish to critique or proscribe.

Protecting the Ecosystem of Human Knowledge: Five Principles

Protecting the Ecosystem of Human Knowledge: Five Principles

Finally! đŸ€© Our position piece: Against the Uncritical Adoption of 'AI' Technologies in Academia:
doi.org/10.5281/zeno...

We unpick the tech industry’s marketing, hype, & harm; and we argue for safeguarding higher education, critical
thinking, expertise, academic freedom, & scientific integrity.
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7 months ago 3944 1974 111 406

Ah, les belles promesses de la LP(P)R...

3 days ago 16 8 0 0

Just published in @science.org 🚀

By controlling how cells align, we show that living nematic tissues can be programmed to generate forces and fold into predictable 3D shapes.

A new platform for tissue engineering and the design of smart active materials! đŸ«†

www.science.org/doi/10.1126/...

4 days ago 78 32 8 2
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For scaling-laws aficionados (I am one), here are the graphs showing power-law behavior for vasculature for embryos (macaque, mouse, turtle).

This means that the vasculature of developing embryos is scale free fractal.

More here: www.biorxiv.org/content/10.6...

6 days ago 22 6 1 0
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Real‐Time Rendering of Dynamic Line Sets using Voxel Ray Tracing Real-time rendering of dynamic line sets is relevant in many visualization tasks, including unsteady flow visualization and interactive white matter reconstruction from Magnetic Resonance Imaging. Hi....

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🚀 New paper accepted at Eurographics 2026!

Real-Time Rendering of Dynamic Line Sets using Voxel Ray Tracing, Published in Computer Graphics Forum

🔗 onlinelibrary.wiley.com/doi/10.1111/...

6 days ago 4 1 1 0
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Mapping nerves in a whole embryos.

We find that across species and development stages, embryonic nerves display (beautiful) fractal geometry.

More here: www.biorxiv.org/content/10.6...

6 days ago 84 32 5 2
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This one may be a little ugly, but we still love it: Asian Sheepshead Wrasse! #LetsChangeThat

1 week ago 50 16 1 1
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How can we learn tissue mechanics directly from cell patterns and images?

In our new preprint, we introduce VertAX, a differentiable vertex-model framework in JAX for simulating epithelia, inferring parameters, and designing target tissue behaviors.

shorturl.at/PUzT0
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1 week ago 42 20 2 0
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#VeilleESR #ESR
Les décisions budgétaires du gouvernement mettent la recherche en grave danger.

Communiqué de la Coordination des responsables des instances (C3N) du CNRS.
c3n-cn.fr/2026/04/10/b...

1 week ago 45 38 0 0
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Opportunities and pitfalls of data contextualization in neuroimaging - Nature Reviews Neuroscience Despite rapid exploitation of the opportunities that contextualization of brain maps affords, potential limitations have received little attention. In this Roadmap, Royer et al. provide practical guid...

Correlating brain maps across datasets is everywhere in neuroimaging. Here we ask: when you contextualize a brain map against genes, metabolism, or connectivity... What can you really conclude? How can we do better? We explore these questions here: tinyurl.com/2dudkevc

2 weeks ago 42 19 0 0

thanks, as always, to the deer mouse for teaching us so much!

And thanks also to @siddhantpusdekar.bsky.social for covering our work!

This was a great collaboration with @adamhantman.bsky.social and lab!

1 week ago 14 3 0 0

Hot off the press 🚹 Epidemic spreading between regions is often modelled on a network đŸ•žïž But how do we describe this process properly? Here, we show how to build a linear transport operator at the network scale, by coarse-graining local advection-reaction-diffusion within edges. shorturl.at/0tAN8

1 week ago 18 9 1 0
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@amahury.bsky.social

I’m big fan of Romain Brette’s work (maybe because in-group influence and inspiration). Maybe this is the field-to-field overlap of the argument you making. It’s all about linking the parallel thought that emerges.

2 weeks ago 4 3 1 0
Roadmap for EvoDevoMec - Sciencesconf.org Roadmap for EvoDevMec

evodevmec2026.sciencesconf.org

"Roadmap for EvoDevoMec", 
Nov. 2nd - 5th, 2026, Université Paris Cité.

2 weeks ago 10 6 0 0
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Wanna do neuroscience in Paris but can't find interesting lab?

Want to come do a sabbatical but don't know who to collaborate?

Check this webpage aggregating ~all the neuroscience labs (+200) in Paris.

⚠only the information of 'verified' profiles is reliable⚠

Please retweet 🙏

parisneuro.fr

2 weeks ago 126 71 2 2

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New preprint by Laurin Mordhorst: 3D histology validates 2D histology for axon radius distributions and conduction velocities.
We asked: if individual axons vary along their length, can classic 2D histology still reflect white-matter organization?
Link: www.biorxiv.org/content/10.6...

2 weeks ago 6 4 1 0
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Des failles conceptuelles et mĂ©thodologiques sapent les affirmations d’un lien entre le microbiote intestinal et l’autisme.
Une revue de littérature complÚte et une critique sévÚre de tout ce champ de recherche:
www.cell.com/neuron/fullt...

3 weeks ago 23 8 1 1
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New paper in Imaging Neuroscience by Sebastian Dresbach, Renzo Huber, et al:

Laminar CBV and BOLD response characteristics over time and space in the human primary somatosensory cortex at 7T

doi.org/10.1162/IMAG...

3 weeks ago 10 7 0 0
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One in three women leave academia after having children ‘Motherhood penalty’ sees female academics who have children less likely to secure a tenured position than their male counterparts, finds LSE study

'A third of [Danish] women no longer work in academia eight years after having a child, according to new research that suggests extra childcare responsibilities are hindering women’s abilities to climb the career ladder.' 1/2

3 weeks ago 32 20 2 3

Rappel: En 2023 le CIR reprĂ©sentait 7,8 milliards d'€ d'argent public...quasi le double du budget cumulĂ© du CNRS, de l'INSERM & de l'INRAE.
L'État subventionne plus la recherche privĂ©e que ses propres organismes scientifiques. C'est Moche.
blogs.mediapart.fr/hendrik-davi...
@hendrikdavi.bsky.social

3 weeks ago 84 72 6 1
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New paper in Imaging Neuroscience by Michiel Cottaar, Saad Jbabdi, et al:

Multi-modal Monte Carlo MRI simulator of tissue microstructure

doi.org/10.1162/IMAG...

3 weeks ago 8 3 1 0
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Phylogenetic Comparative Methods Phylogenetic Comparative Methods

Hi all. I am very excited that after 6 years I finally got my phylogenetic comparative methods book and online exercises online. Feel free to use and share. The book is here: nhcooper123.github.io/pcm-primer/. Note that it is not finished, we had to abandon it before the sunk costs fallacy broke us

3 weeks ago 286 180 9 3
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“They Looked Iranian”: Security Footage Shows Trump Negotiating With White House Patio Umbrellas for Six Hours — The Shovel Donald Trump’s supposed ‘talks’ with Iranian officials were actually with a bunch of patio umbrellas in a White House courtyard, it has emerged.

I chortled.
It's so dumb it's believable.
theshovel.com.au/2026/03/25/t...

3 weeks ago 4 2 0 0
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A weakly structured stem for human origins in Africa - Nature An analysis of models of human populations in Africa, using some newly sequenced genomes, finds that human origins in the continent can best be described by a weakly structured stem model.

4. Work led by @apragsdale.bsky.social

www.nature.com/articles/s41...

3 weeks ago 3 2 0 0
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How does the cerebellum contribute to cognitive functions? The role of the cerebellum in motor functions is well understood. But why is the same circuitry engaged in functions such as working memory, language, and social cognition? This Unsolved Mystery looks...

Also out today - A quick intro piece on the role of the cerebellum in cognition. What does it do? How will we find out? This is what @actlab.bsky.social and I think the critical questions are right now. It was fun to write - especially the section on evolution....

journals.plos.org/plosbiology/...

4 weeks ago 95 40 3 4