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Posts by Daniel Cooney

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VisualPDE VisualPDE brings interactive science and mathematics to the web. Explore topics including waves, viruses and reaction—diffusion patterns, or create your own simulation.

Andrew's talk will highlight the use of @visualpde.com for visualizing numerical solutions to PDEs and related work informing a wide range of interdisciplinary collaborations.

You can check out the VisualPDE platform to try out your own simulations. visualpde.com

6 hours ago 1 2 0 0

In a few minutes, Professor Andrew Krause (@blindmath.bsky.social) from Durham University will be a giving a talk on "Communicating Nonlinear Dynamics Across Boundaries via Interactive Simulations".

Please see the link below for information about joining the seminar.

6 hours ago 3 1 2 0

Right now, Dr. Desmond Yengi from Grinnell College is giving a talk titled "Title: Exploring Wave Dynamics and Collective Behavior in an Oscillatory Chemical System: Insights from the Belousov-Zhabotinsky Reaction".

Please see below for information about joining the talk.

2 weeks ago 5 1 0 0

What I learned at the AMS Special Session on Evolutionary Game Theory this weekend.

Thank you to @danielcooney1.bsky.social, Alex McAvoy, Thomas Zdyrski, @julieblackwood.bsky.social, Olivia Chu, Jonathan Touboul, Phil LaPorte, and everyone else for a great session!

3 weeks ago 10 2 1 0

At 11am Eastern / 10am Central today, Professor Abdel Halloway from Case Western Reserve University will be giving a talk on eco-evolutionary dynamics of cooperation and mutualism.

Please see below for more information about joining the talk.

4 weeks ago 9 3 0 0

This was a really fun project to work on with Yuxuan, Kaisheng, and Yefei. We explored two PDE models for a diffusible public good in which cooperators and defectors can perform either purely diffusive motion or a chemotaxis-like directed motion towards increasing concentrations of the public good.

4 weeks ago 1 0 0 0
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Pattern Formation in a Spatial Public Goods Dilemma due to Diffusive or Directed Motion The costly provision of public goods serves as a model problem for the evolution of cooperative behavior, presenting a social dilemma between the collective benefits of shared resources and the indivi...

I am happy to share this new preprint with Yuxuan Zhao, Kaisheng Zhu, and Yefei Zhang on Pattern Formation in a Spatial Public Goods Dilemma due to Diffusive or Directed Motion.

arxiv.org/abs/2603.21025

4 weeks ago 10 1 1 0

Right now, Dr. Rui Wang from New York University is giving a talk on "Applied Topology, Topological Spectral Theory, and Machine Learning Models for Biological Applications".

Please see below for more information to join via Zoom.

1 month ago 1 1 0 0

Right now, Professor Longhua Zhao from Case Western is giving a talk on fluid-structure interaction.

Please see below for information about joining the seminar.

1 month ago 3 2 0 0
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Pattern Formation in Agent-Based and PDE Models for Evolutionary Games with Payoff-Driven Motion - Bulletin of Mathematical Biology Spatial structure can play an important role in the evolution of cooperative behavior and the achievement of collective success of a population. In this paper, we explore the role of random and direct...

New #BulletinMathBio paper by @tianyongyao.bsky.social, Chenning Xu, and @danielcooney1.bsky.social on Pattern Formation in Agent-Based and PDE Models for Evolutionary Games with Payoff-Driven Motion.

link.springer.com/article/10.1...

1 month ago 6 1 0 0
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Pattern Formation in Agent-Based and PDE Models for Evolutionary Games with Payoff-Driven Motion - Bulletin of Mathematical Biology Spatial structure can play an important role in the evolution of cooperative behavior and the achievement of collective success of a population. In this paper, we explore the role of random and direct...

I am really happy to share this paper with @tianyongyao.bsky.social and Chenning Xu on Pattern Formation in Agent-Based and PDE Models for Evolutionary Games with Payoff-Driven Motion, which is now online in #BullMathBio.

link.springer.com/article/10.1...

1 month ago 9 1 0 0

Right now, John Metzcar from the Cleveland Clinic is giving a talk titled "GBM-FORECAST: Predicting recurrence in glioblastoma using serial white blood cell counts and patient advocacy influences on my career". Please see below for information to join.

1 month ago 1 1 0 0

I would guess that Rick Ankiel had enough success as a pitcher and hitter to have done either of these things, but I wouldn't be be particularly comfortable guessing him over the two obvious ones.

2 months ago 0 0 1 0
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Evolutionary game theory researches: Join us for the ‘Evolutionary Games: Mathematical Theory and Biological Insights’ workshop at NITMB!

Travel applications are due Wednesday, March 11th - www.nitmb.org/evolutionary...

3 months ago 11 7 0 0

Congratulations, Professor @evo-eco-onco.bsky.social!

2 months ago 1 0 1 0

In a few minutes, Haridas Das from Oklahoma State University will be giving a talk on modeling infectious disease dynamics in metapopulations.

Please see the link below for more information about joining the talk.

2 months ago 4 1 0 0
Midwest Mathematical Biology Seminar The Midwest Mathematical Biology Seminar will be a series of virtual talks on mathematical biology featuring speakers from the Midwest region and beyond. All areas of mathematical biology will be repr...

I am happy to announce that the Midwest Mathematical Biology Seminar will be returning for the Fall 2025 semester. Our talks will be held on Tuesdays at 11am US/Canada Eastern time (10am Central time).

Please see the link below for more information.

sites.google.com/view/midwest...

8 months ago 28 10 1 22

For a while, I was under the impression that the checkmate was named after the Arabian horse, highlighting the key role played by the knight.

(Due to that misunderstanding, I often remember it as the ``horse checkmate" when I am trying to avoid it in a game.)

3 months ago 0 0 0 0

Right now, Dr. Maximillian Newman (University of Chicago) is giving the first Midwest Mathematical Biology Seminar talk for the spring semester, presenting on models of genetic inheritence across the genome.

Please see below for info to join.

3 months ago 4 1 0 0
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Provirus induction diversifies adaptive variation in Pseudomonas aeruginosa lysogen populations Pseudomonas aeruginosa is a Gram-negative opportunistic pathogen that forms chronic infections in people with cystic fibrosis. Often P. aeruginosa strains are lysogens, infected with proviruses, that ...

Happy new year! The second big project of my PhD in Rachel Whitaker's lab is now up! 🎉 We look at how provirus infection affects the evolution of the bacterial chromosome with different types of viral induction – with CRISPRs or antibiotics. Take a peek 🦠 www.biorxiv.org/content/10.6...

3 months ago 45 21 4 1
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When I taught a mathematical biology course in Spring 2025, I used the @smbmathbiology.bsky.social baseball cards from the previous JMM as a first-day giveaway to the class.

As an optional assignment, the students could send me a paper authored by the mathematical biologist whose card they picked.

3 months ago 0 0 0 0

I am looking forward to buying some of the mathematical biology baseball cards from the @smbmathbiology.bsky.social booth at the JMM. @jointmath.bsky.social #JMM2026

3 months ago 2 1 1 0
Picture of the conference booth for the Society for Mathematical Biology, which features baseball cards of famous mathematical biologists.

Picture of the conference booth for the Society for Mathematical Biology, which features baseball cards of famous mathematical biologists.

SMB is at JMM! Stop by our booth (#423) to learn more about what we've been up to and to add to your SMB Baseball card collection! #JMM2026 @jointmath.bsky.social

3 months ago 8 1 0 1

In the last talk for the semester, Tyler Simmons from the University of Minnesota is about to give a talk on "Chemically Self-Assembled Nanorings: Therapeutic Efficacy, Response Variability, and Guiding Principles".

Please see below for information on joining the seminar.

4 months ago 4 1 0 0

Right now, Binan Gu from WPI is giving a talk on " Modeling Cell Transport in Deformable Microenvironments: From Engineered Scaffolds to the Blood–Brain Barrier".

Please see the link below for information to join the seminar.

4 months ago 3 1 0 0
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Hi everyone! I'm co-organizing this retreat/workshop June 15-19 for those looking to get started in mathematical/computational modeling of biological processes. Location is a beautiful farm in NC. Please share with students and others who want to build modeling skills. Interdisciplinarity welcome!

4 months ago 47 26 1 2

Right now, @tedloch.bsky.social from Rice University is giving a talk on a coordination game approach to studying symbiosis.

Please see below for more information about joining the talk.

4 months ago 4 1 0 0
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This is such a compelling game to follow on play-by-play while taking a train in the snow back to Champaign.

4 months ago 0 0 0 0
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Big congratulations to Dr Nikhil Sharma on receiving the Kiel Life Science Postdoc Award 2025! His outstanding work in theoretical biology and evolutionary graph theory makes us proud. Well deserved! 👏 #KLS #MPIEvolBio
www.evolbio.mpg.de/3847270/kiel...

(Photo: Christian Urban, Kiel University)

4 months ago 25 4 0 0

This Plasmid Project was directly inspired by the results on multilevel selection that Dan introduced me to! In this thread he explains some fundamental theoretical results that were so influential to me as a Scientist. Looking forward to more Math-driven experiments!!! Thanks Dan!

4 months ago 3 1 0 0