🚨 AIMNet2 MLIP models are now available on @huggingface 😊 Check it out: huggingface.co/isayevlab and updated documentation: isayevlab.github.io/aimnetcentral/… #compchem #compchemsky #chemsky
Posts by Frederic Mentink-Vigier
Glad to share our new work: RitS (Right into the Saddle): a generative model for direct transition state (TS) prediction.
📄 Paper: chemrxiv.org/doi/full/10.26…
🤠 Code: github.com/isayevlab/RitS
• Flow-matching model with explicit stereochemistry control
• Direct TS generation from SMILEs #compchem
New issue of @ssnmrjournal.bsky.social (volume 142)
www.sciencedirect.com/journal/soli...
#NMRchat
Screenshot of "Manage Plugins" window in Avogadro2, including over 20 plugins. A table shows several plugins including generators, RDKit, cclib, build-ase, xtb, aimnet2, genice2, TurtleMol, multicharge, antechamber, chiraltube, etc. with a README on the right hand side and buttons to search, install from a local directory, remove selected, and install / update selected
Screenshot of an example plugin for Chiraltube, indicating n, m values, number of repeats, and material, with MoS2 selected and the generated nanotube in the background with yellow spheres for sulfur atoms and turquoise spheres for Mo atoms
Screenshot of ORCA input generator, showing Basic, SCF, Basis, and Electronic Property tabs, and input file text.
Avogadro 2.0 isn't just a viewer and editor — it's an extensible platform for chemistry
A plugin system lets you add ML & electrostatic models, new builders and tools. Already over 20 available…
Build the tools you need: avogadro.cc/develop/plug...
#avogadro #openscience #compchem #opensource
Visualization of the COVID spike protein 6vxx with real-time shadows in Avogadro2 to give depth effects. All hydrogen atoms are hidden. Grey spheres are carbon atoms, red spheres are oxygen, blue spheres are nitrogen, and yellow spheres are sulfur atoms.
Screenshot from Avogadro showing a C₆₀ buckminsterfullerene cage with a translucent purple sodium atom inside
Screen rendering of a zeolite supercell showing shadows and depth blurring. Brown spheres are silicon atoms and red spheres are oxygen atoms
Rendering of a protein surrounded by a solvation sphere of water in wireframe view (using red-white lines to indicate the water molecules)
Avogadro 2.0's rendering was rebuilt for modern GPUs. Smooth even with tens of thousands of atoms.
Real-time shadows and ambient occlusion give depth and clarity — and a new layer system lets you hide solvent, toggle styles, and focus on what matters.
#opensource #openscience #compchem
No fooling, Avogadro 2.0.0 is finally here!
Rebuilt from the ground up: fast modern rendering, improved stability, designed for the next generation of molecular, biomolecule, and materials research & education. 🧪 ⚗️
avogadro.cc/install/
discuss.avogadro.cc
#opensource #openscience #compchem
I'm glad to see the theoretical PXRD working :)
Quick question, can it predict molecular salts?
Pleased to share my latest pre-print with @graemeday.bsky.social
chemrxiv.org/doi/full/10....
This is a proof of concept work for a means of fast CSP by forming and optimising analogues of previously predicted crystal structures of similar molecules
#chemsky #compchemsky
New highlight: Stochastic tensor contraction for quantum chemistry
(Monte Carlo Meets Coupled Cluster: Slashing the Cost of CCSD(T)) www.compchemhighlights.org/2026/03/stoc... #compchem
From reddit r/OrganicChemistry @Impressive_Honey8334 I updated my free NMR Impurity Solver to include 13C support and bulk peak parsing
From reddit r/OrganicChemistry @Impressive_Honey8334 I updated my free NMR Impurity Solver to include 13C support and bulk peak parsing www.reddit.com/r/OrganicChe... #NMRchat 🧲
@maer.bsky.social @ninowili.bsky.social
conference poster
RT JEOL USA @JEOLUSA We are excited to be @enc-conference.org on the beautiful Asilomar site in Pacific Grove, CA. Many activities are planned with the highlight being our mini-symposium on Sunday, April 12, 12:00 PM - 2:30 PM. Link to register: go.jeolusa.com/ENC_2026_Sym...
#NMR #NMRchat 🧲
Protein–polymer conjugates: how do we understand their structure & dynamics? 🔬Our new review highlights EPR spectroscopy+complementary techniques for insights in vitro & in cells.
Read more 👇
www.sciencedirect.com/science/arti...
#ProteinPolymerConjugates #EPR #Biomaterials #PolymerScience
#compchem #machinelearning #quantumcomputing #compbio New preprint: "The Convergence Frontier: Integrating Machine Learning and High Performance Quantum Computing for Next-Generation Drug Discovery".
@qubit-pharma.bsky.social
arxiv.org/abs/2603.17790
@tuowang.bsky.social @nationalmaglab.bsky.social
@nationalmaglab.bsky.social
What if NMR crystallography could be 100x faster — without sacrificing accuracy?
UMA can fully replace DFT for geometry optimization. and combined with ShiftML3, predictions are statistically indistinguishable from DFT benchmarks
#NMRchat #CompChem
chemrxiv.org/doi/full/10....
TOC Graphic
#NMRchat Broadband cross polarization for ultra-wideline magic-angle spinning NMR pubs.rsc.org/en/Content/ArticleLandin...
Honoring the legacy of Karl F. Freed (1942–2026). A titan who decoded molecular complexity, mentored Nobel laureates, and shaped the foundations of theoretical chemistry for 50+ years at the University of Chicago.
Read the full remembrance: shorturl.at/APz0x
#UChicagoChem #ChemLegacy #KarlFreed
Jim Emsley (1934-2026)
We're pleased to share this preprint on @chemrxiv.org
Towards Foundation Models Trained from Crystal Structure Prediction of the Organic Molecular Solid State
40+ million predicted crystal structures + accurate ML potentials for organic molecular crystals
chemrxiv.org/doi/full/10....
1/10
Any update on g-XTB? #CompChem
@angewandtechemie.bsky.social (open) Rapid Assignment of Chemical Shifts From Crystal Structures in Solid-State NMR, Ruben Rodriguez-Madrid, Jacob Brian Holmes, Lyndon Emsley* onlinelibrary.wiley.com/doi/10.1002/... #NMRchat 🧲
Visit www.globalnmr.org for updates and stay tuned for more details! Follow us on X (@global_nmr), Bluesky (@globalnmr), LinkedIn (@global nmr discussion meetings) and WeChat (@Global NMR Discussions).
Magnetic resonance enthusiasts! 🧲
Save the date for the Global NMR Online Conference 🗓️ July 22-24, 2026! Fully online, 3 days of MR presentations & discussions (free & open to all! No travel, no fees, just science!)
Stay tuned for registration details! #GlobalNMROC2026 #NMR
Aaron Rossini of Iowa State and Ames National Laboratory with the nuclear magnetic resonance instrument in his Hach Hall lab. Iowa State University/Christopher Gannon
Science Briefing: High magnetic fields reveal atom-level structures of drugs, materials. Iowa State's Aaron Rossini has developed solid-state NMR methods that are helping design better drugs, catalysts and semiconductors www.news.iastate.edu/news/science... #NMRchat #NMR 🧲
Thank you very much indeed @rociomer.bsky.social and @smnlssn.bsky.social for the opportunity to visit Chalmers, and to speak in this series! #compchem