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Posts by Andrew Krause

And yet, here we are! ❤️

15 hours ago 0 0 0 0
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Modeling emergent patterns of dynamic desert ecosystems In many desert ecosystems, vegetation is both patchy and dynamic: vegetated areas are interspersed with patches of bare ground, and both the positioning and the species composition of the vegetated a...

People in geography/earth sciences and related fields who use more complicated models have made similar points to your comment above. Will have a read through your perspective on it, but it looks interesting!

E.g. the critique here:
esajournals.onlinelibrary.wiley.com/doi/full/10....

1 week ago 1 0 0 0
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Sum of Harmonic Series

Yes of course! Shame on me for spending 3 seconds before writing 😁.

Amusingly, this Desmos calculator truncates the value of N (presumably something like a 'maximal for loops' around 10^8) such that one gets very nearly 10 times less than the correct sum you suggest!
www.desmos.com/calculator/6...

2 weeks ago 2 0 0 0

Given there are an estimated 10^81 fundamental particles in the Universe, I did a (possibly erroneous!) calculation that the first 10^82 terms sum to just under 19.

2 weeks ago 2 0 1 0

Some of the best/worst parts of academic pastoral supervision is how personal/individual it can be in learning from one another about how we are experiencing the undergraduate education. Of course, some individual supervisors do this with varying levels of care/neglect perhaps, so it can be mixed!

2 weeks ago 2 0 0 0
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Opinion | I Saw Something New in San Francisco

www.nytimes.com/2026/03/29/o...

This Ezra Klein piece on how the adopters are using— being used by?— LLMs is horrifying.

It hardens my resistance to ever turning one of these toys on at the same time that it makes me more sure that I'm going to be completely out of step and behind as a result.

3 weeks ago 359 44 37 35
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Simple systems, complex dynamics: lessons from minimal gene regulatory networks Small gene regulatory networks (GRNs) are well-established biological modules that underpin cellular decisions and dynamical function. Their theoretic…

Did you think that small gene regulatory networks are only capable of very simple dynamics? Guess again! Even very simple networks are capable of a rich dynamics. Check out our brand new review paper: www.sciencedirect.com/science/arti... @perez-carrasco.bsky.social

3 weeks ago 9 2 0 0
Society for Modeling and Theory in Population Biology - Linking Theory and Practice in Eco-evolutionary Modelling

🚨 SMTPBconnect Event: Linking Theory and Practice in Eco-evolutionary Modelling
😳 Tomorrow (Weds March 18 2-5PM Pacific Time, Thurs March 19 8-11AM Australian Eastern Time)
🤠 Sponsored by @smtpb.bsky.social, hosted by Maria Kleshnina

smtpb.org/event-6562940

1 month ago 22 7 1 0
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Interactive simulation | VisualPDE An interactive simulation of a partial differential equation, live in your browser with VisualPDE.

You might like this @visualpde.com simulation. It starts with a point source in a way equation, and you click to add obstacles. Press 'r' or click the second button from the bottom on the left to "restart" the simulation. Everything can be customized as you'd like.

visualpde.com/sim/?preset=...

1 month ago 0 0 0 1
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Bureaucracy is putting universities on the wrong track to respond to AI We cannot bureaucratise our way into producing better thinkers, any more than we can automate wisdom, says Akhil Bhardwaj

"The institution built to nurture enquiry has increasingly become one that merely measures, audits and verifies it. We produce abundant evidence of learning, but not necessarily more learning itself."

Even before LLMs, this was increasingly problematic!

www.timeshighereducation.com/opinion/bure...

1 month ago 0 0 0 0
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Right now, Professor Longhua Zhao from Case Western is giving a talk on fluid-structure interaction.

Please see below for information about joining the seminar.

1 month ago 3 2 0 0
A poster for the symposium described in the post. It lists the dates of 8-11 of September. It has a photo of the Durham castle, and a list of the invited speakers (which is also on the website linked in the post). It also has the application deadline of March 31st. The ICMS logo and Durham University logos are both displayed at the bottom.

A poster for the symposium described in the post. It lists the dates of 8-11 of September. It has a photo of the Durham castle, and a list of the invited speakers (which is also on the website linked in the post). It also has the application deadline of March 31st. The ICMS logo and Durham University logos are both displayed at the bottom.

Join us this September 8-11th for the Durham Symposium on Mathematical Approaches to Spatial Biology! Organized with @gcelora.bsky.social @valeriagiunta.bsky.social and Denis Patterson. This will be an exciting and interactive discussion-driven event!

sites.google.com/view/durham-...

2 months ago 14 8 2 0
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Is Peer Review a Good Idea? | The British Journal for the Philosophy of Science: Vol 72, No 3 Prepublication peer review should be abolished. We consider the effects that such a change will have on the social structure of science, paying particular attention to the changed incentive structure ...

Not exactly the same conclusion but in a similar vein to @lastpositivist.bsky.social's nice paper against peer review:

www.journals.uchicago.edu/doi/10.1093/...

1 month ago 5 3 0 0

I would much prefer Universities that were not laser-focused on credentialism, so that we could instead consider crazy ideas like "teaching."

1 month ago 3 0 1 0

I really am increasingly drawn to the idea that, outside of areas where professional accreditation matters, I think academics obsession with assessment is just a huge waste of time.

There is very little equitable assessment of mathematics that correlates at all to how mathematicians work.

1 month ago 2 0 1 0
Text which says:

"
You said:
Uploaded image
Can you transcribe the two paragraphs here into text I can copy and paste?

ChatGPT said:
Here is a clean transcription of the two paragraphs:

Unlike the theory, models are restricted by technical considerations to a few components at a time, even in systems which are complex. Thus a satisfactory theory is usually a cluster of models. These models are related to each other in several ways: as coordinate alternative models for the same set of phenomena, they jointly produce robust theorems; as complementary models they can cope with different aspects of the same problem and give complementary as well as overlapping results; as hierarchically arranged “nested” models, each provides an interpretation of the sufficient parameters of the next higher level where they are taken as given. In Figure 3 we show schematically the relations among some of the models in the theory of community structure.

The multiplicity of models is imposed by the contradictory demands of a complex, heterogeneous nature and a mind that can only cope with few variables at a time; by the contradictory desiderata of generality, realism, and precision; by the need to understand and also to control; even by the opposing esthetic standards which emphasize the stark simplicity and power of a general theorem as against the richness and the diversity of living nature. These conflicts are irreconcilable. Therefore, the alternative approaches even of contending schools are part of a larger mixed strategy. But the conflict is about method, not nature, for the individual models, while they are essential for understanding reality, should not be confused with that reality itself."

Text which says: " You said: Uploaded image Can you transcribe the two paragraphs here into text I can copy and paste? ChatGPT said: Here is a clean transcription of the two paragraphs: Unlike the theory, models are restricted by technical considerations to a few components at a time, even in systems which are complex. Thus a satisfactory theory is usually a cluster of models. These models are related to each other in several ways: as coordinate alternative models for the same set of phenomena, they jointly produce robust theorems; as complementary models they can cope with different aspects of the same problem and give complementary as well as overlapping results; as hierarchically arranged “nested” models, each provides an interpretation of the sufficient parameters of the next higher level where they are taken as given. In Figure 3 we show schematically the relations among some of the models in the theory of community structure. The multiplicity of models is imposed by the contradictory demands of a complex, heterogeneous nature and a mind that can only cope with few variables at a time; by the contradictory desiderata of generality, realism, and precision; by the need to understand and also to control; even by the opposing esthetic standards which emphasize the stark simplicity and power of a general theorem as against the richness and the diversity of living nature. These conflicts are irreconcilable. Therefore, the alternative approaches even of contending schools are part of a larger mixed strategy. But the conflict is about method, not nature, for the individual models, while they are essential for understanding reality, should not be confused with that reality itself."

Related is the following passage from Levins, arguing for the need of diversity in schools of thought/paradigms in science:

www.jstor.org/stable/27836...

1 month ago 1 0 1 0
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Against Method - Wikipedia

I like much of Feyerabend's writing about the scientific method. I disagree with a strong form of this, which might be "there is little value in formalizing good scientific practice," but the weaker form of no universally better methods is hard to argue with!

en.wikipedia.org/wiki/Against...

1 month ago 3 0 2 0

I haven't encountered this too much (that I can tell!) but it's also more than zero, and I have a similar reaction to Rose here. As she says... it's just very bizarre to do a philosophy degree if you don't actually want to think and work through ideas. What... what are you doing here?

2 months ago 272 39 15 5
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Philosophy as fact-based discipline: 200 philosophical facts - Philosophical Studies Philosophical Studies -

At least there are a large collection of facts to put on the exams!

link.springer.com/article/10.1...

2 months ago 1 0 0 0
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The fact that I could have genuine friends I knew only through plain text (no one had profile pics or avatars yet) felt like some kind of utopian dream at the time when I was an awkward kid irl. I think that dynamic is still one of the things that draws me to text-based social media over video/pics.

2 months ago 953 26 35 7

We are very grateful for funding from @icms-edinburgh.bsky.social, and for our excellent invited speakers @danieleavitabile.bsky.social, @zenahadjivasiliou.bsky.social, @cicelykrystyna.bsky.social, @pearce-maths.bsky.social, @kylewedgwood.bsky.social + those listed above not on Bluesky.

2 months ago 0 1 0 0
A poster for the symposium described in the post. It lists the dates of 8-11 of September. It has a photo of the Durham castle, and a list of the invited speakers (which is also on the website linked in the post). It also has the application deadline of March 31st. The ICMS logo and Durham University logos are both displayed at the bottom.

A poster for the symposium described in the post. It lists the dates of 8-11 of September. It has a photo of the Durham castle, and a list of the invited speakers (which is also on the website linked in the post). It also has the application deadline of March 31st. The ICMS logo and Durham University logos are both displayed at the bottom.

Join us this September 8-11th for the Durham Symposium on Mathematical Approaches to Spatial Biology! Organized with @gcelora.bsky.social @valeriagiunta.bsky.social and Denis Patterson. This will be an exciting and interactive discussion-driven event!

sites.google.com/view/durham-...

2 months ago 14 8 2 0

One (among many other) of the main applications of functional analysis is to extend these ideas to PDEs.

2 months ago 1 0 1 0

From the stability/dynamical systems perspective, the study of self-adjointness of an operator is often tied to questions like "does it have real eigenvalues? Can we say that the spectrum lies in the left-hand side of the complex plane (which implies a kind of stability)?"

2 months ago 1 0 1 0

That's a common thing to do! Linearizing a PDE around some steady state solution for example gives a linear operator which can be studied to understand stability. The same is true of n-dimensional systems of ODEs; linearizing gives a Jacobian matrix which determines stability.

2 months ago 1 0 1 0

For linear operators, the adjoint operator is typically easy to find, though I guess this depends on the function space/properties of the inner product. I don't know an example where it isn't algorithmic.

However, there are lots of approximations to a general operator by self-adjoint operators.

2 months ago 1 0 1 0
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VisualPDE VisualPDE brings interactive science and mathematics to the web. Explore topics including waves, viruses and reaction—diffusion patterns, or create your own simulation.

This was the motivation for the "reverse-order" from how I learned the topic.

You may also be interested in VisualPDE.com as a way to build intuition, especially about nonlinear PDE. This is rather a different, but complementary, approach to the analysis-focused way of approaching PDE.

2 months ago 1 0 0 0
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Partial Differential Equations: Second Edition

My personal recommendations might be (roughly in reverse order of how advanced they are):

bookstore.ams.org/gsm-19-r

www.amazon.co.uk/Introductory...

www.amazon.co.uk/Principles-M...

(As a student I studied them in the reverse order; the last Chapter of the 3rd book is measure theory).

2 months ago 1 0 1 0
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Metals, Microbes, and Mathematics: Understanding Coexistence with Toxic Nutrients at Newcastle University on FindAPhD.com PhD Project - Metals, Microbes, and Mathematics: Understanding Coexistence with Toxic Nutrients at Newcastle University, listed on FindAPhD.com

Next, a glorious combo of maths, metals, and microbial ecology. This one is supervised by Denis Patterson and @blindmath.bsky.social, also at Durham.

www.findaphd.com/phds/project...

2 months ago 5 2 1 0
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Nutrient uptake in commensal bacteria: exploring uncharacterised TonB-dependent transporters. at Newcastle University on FindAPhD.com PhD Project - Nutrient uptake in commensal bacteria: exploring uncharacterised TonB-dependent transporters. at Newcastle University, listed on FindAPhD.com

Lots of PhD opportunities for UK + international students involving my lab. Topics relate to metals & microbiology.

First up: TonB-dependent receptors in commensal Neisseria in my lab at Durham, with @kjosts.bsky.social and @mattbashton.bsky.social.

www.findaphd.com/phds/project...

2 months ago 24 23 1 1