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Posts by VolumeEM

Published quarterly, the vEM Community Initiative newsletter is a great platform to share ideas and connect with a wider audience. Get in touch if youโ€™d like to submit a Tech Bite.

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vEM Community Newsletter - March 2026 Email from Danforth March 2026 vEM Newsletter volume electron microscopy โ€Š CCP-volumeEM: Establishing a sustainable computational community for volume EM The Collaborative Computational Project (CCP)

๐Ÿšจ New feature launch in our latest newsletter!

Weโ€™ve just introduced Tech Bites, short, focused articles that share practical insights and innovations for the vEM Community. Check out the newsletter to explore our two inaugural Tech Bites, with more to come in future issues! conta.cc/4bJhsmk

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This community-informed list is independent of sponsorship, and inclusion does not imply endorsement by the volumeEM Community Initiative.

๏ปฟIf your organization supports the volume EM field and isnโ€™t yet represented, we warmly invite you to get in touch and connect with us.

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The list highlights companies and societies providing imaging equipment, sample preparation tools and reagents, data storage and analysis solutions, and professional networks.

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New Web Page - Volume EM Industrial Partners
www.volumeem.org/industrial-p...

Weโ€™re excited to introduce our newly curated Industrial Partners page, showcasing organizations recognized by the volumeEM Community as key contributors in the field.

1 month ago 4 3 1 0
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vEM Community Newsletter - February 2026 Email from Danforth February 2026 vEM Newsletter volume electron microscopy โ€Š vEM Technology Forum 2026 - Indicate your interest to attend We are pleased to announce that planning is underway for our

We've just published our latest newsletter: conta.cc/4rqHX6D

Please take a moment to check it out and share your thoughts.

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The result? Stunning insights into cell structures such as nuclei, mitochondria are possible, as well helping us better understand many important diseases.

2 months ago 1 0 0 0
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This short animated video offers a clear, visual introduction to volume electron microscopy (vEM), showing how ultra-thin serial planes of cells are imaged at the nanoscale with electrons and then computationally assembled into detailed 3D views.

2 months ago 0 0 1 0
Overview of Volume Electron Microscopy
Overview of Volume Electron Microscopy YouTube video by Volume EM Community

๐ŸŽฌ Just dropped: our latest video!

If youโ€™re new to volume EM, a non-scientist, or a scientist from another field, this video is a great place to start.

#vEM #volumeelectronmicroscopy #volumeemcommunity

www.youtube.com/watch?v=jJmW...

2 months ago 5 4 1 0
How To Prepare An ITO Coverslip For Array Tomography
How To Prepare An ITO Coverslip For Array Tomography YouTube video by Volume EM Community

๐ŸŽฅ New Video Alert!
We are excited to share a new how-to video on preparing an ITO coverslip for array tomography. A big shoutout to Aaron Sait for creating this clear, step-by-step tutorial.

๐Ÿ“บ Check out the video: youtu.be/DMr1Aveb1Zg?...

#volumeEM #ArrayTomography

4 months ago 1 0 0 0
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Volume EM Visualization of 3D Synaptic Ultrastructure in Postmortem Human Prefrontal Cortex - FocalPlane Volume EM Visualization of 3D Synaptic Ultrastructure in Postmortem Human Prefrontal Cortex - Blog series

Volume EM Visualization of 3D Synaptic Ultrastructure in Postmortem Human Prefrontal Cortex

This @volumeem1.bsky.social case study covers the challenges, solutions and impact of ultrastructural analysis of postmortem brain tissue.

focalplane.biologists.com/2025/10/31/v...

5 months ago 9 1 0 1
LinkedIn This link will take you to a page thatโ€™s not on LinkedIn

๐Ÿ—ณ๏ธ Voting is now open for the 2025 Volume EM Image Competition!

โœ… Vote for your top 3 favorites in each category
๐Ÿ•™ Voting closes October 9 at 4:00 PM BST / 10:00 AM CT
๐Ÿ† Winners will be announced at the Town Hall Meeting later that day!
๐Ÿ‘‰ Cast your vote here: www.volumeem.org/vote_awesome...

6 months ago 1 1 0 0
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๐ŸŒŸ Awesome vEM Images Competition deadline extended to Oct 6, 5 PM CT! ๐ŸŒŸ

Submit to one or both categories:
1๏ธโƒฃ The Power of EM
2๏ธโƒฃ Bringing Meaning to the Data

๐Ÿ† $250 for 1st, $100 for 2nd & 3rd (each category)

๐Ÿ”— www.volumeem.org/awesome-imag...

Details and last year's winning images โฌ‡๏ธ

6 months ago 8 6 1 2

@royalmicrosoc.bsky.social @bioimagingna.bsky.social @bioimaginguk.bsky.social @globalbioimaging.bsky.social @micro-au.bsky.social @ccp-volumeem.bsky.social

6 months ago 0 0 0 0

๐Ÿ—ณ๏ธ Voting opens Oct 7 on our site
๐Ÿ† Winners announced Oct 9 @ virtual Town Hall
๐Ÿ“ง Questions? vemcommunity@gmail.com

#volumeEM #AwesomevEMImages

6 months ago 0 1 1 0
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๐ŸŒŸ Awesome vEM Images Competition deadline extended to Oct 6, 5 PM CT! ๐ŸŒŸ

Submit to one or both categories:
1๏ธโƒฃ The Power of EM
2๏ธโƒฃ Bringing Meaning to the Data

๐Ÿ† $250 for 1st, $100 for 2nd & 3rd (each category)

๐Ÿ”— www.volumeem.org/awesome-imag...

Details and last year's winning images โฌ‡๏ธ

6 months ago 8 6 1 2
Microsoft Forms

LAST CALL!

Please take the anonymous, 10-minute survey so we can learn more about the computational needs of the volumeEM community: forms.office.com/e/eMAJGCKUnc

The survey will close on Friday 19th September, so make sure your voice is heard!

7 months ago 0 1 0 0
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Awesome image competition - 2025 ๐Ÿ“ธ We are seeking impressive volume EM (vEM) images as part of our mission to promote our Volume EM Community Initiative and vEM techniques to the world! We'd love to offer you the opportunity to...

๐Ÿ“ฃ The Awesome vEM Images Competition is back!

Submit your images in one of two categories:
๐Ÿ–ผ๏ธ The Power of vEM
๐Ÿง  Bringing Meaning to the Data (New!)

๐Ÿ† Prizes: $250 for 1st place, $100 for 2nd & 3rd in each category
๐Ÿ“… Deadline: Oct 2, 5PM CT
๐Ÿ”— More details: www.volumeem.org/awesome-imag...

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๐Ÿ“ฃ Join Us for the 6th Annual Volume EM Community Initiative Town Hall Meeting on October 9th, 2025 from 3-6pm BST / 10am-1pm ET. A key theme of this yearโ€™s Town Hall is strengthening connections across the global community.

๐Ÿ‘‰ Register now on our website: www.volumeem.org/2025-town-ha...

7 months ago 5 1 0 0
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Exchange of Experience 2025 | Global BioImaging Join Us At: Imaging in 2035 - Sustaining Infrastructure Ecosystems and Advanced Technologies October 6-10, 2025 | Hybrid Event | Montreal, Canada Be part of thโ€ฆ

๐—ช๐—ต๐—ฎ๐˜ ๐—œ๐˜€ ๐—š๐—•๐—œ๐˜…๐—•๐—œ๐—ก๐—”๐Ÿฎ๐Ÿฌ๐Ÿฎ๐Ÿฑ?
Two conferences. One global conversation.
We bring together the ๐—š๐—น๐—ผ๐—ฏ๐—ฎ๐—น ๐—•๐—ถ๐—ผ๐—œ๐—บ๐—ฎ๐—ด๐—ถ๐—ป๐—ด ๐—˜๐˜…๐—ฐ๐—ต๐—ฎ๐—ป๐—ด๐—ฒ ๐—ผ๐—ณ ๐—˜๐˜…๐—ฝ๐—ฒ๐—ฟ๐—ถ๐—ฒ๐—ป๐—ฐ๐—ฒ ๐—–๐—ผ๐—ป๐—ณ๐—ฒ๐—ฟ๐—ฒ๐—ป๐—ฐ๐—ฒ and the ๐—•๐—œ๐—ก๐—” ๐—–๐—ผ๐—บ๐—บ๐˜‚๐—ป๐—ถ๐˜๐˜† ๐—–๐—ผ๐—ป๐—ด๐—ฟ๐—ฒ๐˜€๐˜€ for a unique week of knowledge exchange.

10 months ago 3 4 1 1
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Big news! volumeEM has been ranked the second most requested technology of 2024 in Biological Imaging in the latest Euro-Bioimaging Annual Report!

๐Ÿ“– Read the full report here: www.eurobioimaging.eu/news/euro-bi...

#volumeEM

8 months ago 15 2 0 0

Presented by:
by Jason Yin, Jason Liang and Joseph Sall from Alice Liang Lab, NYU Langone Health Microscopy Core, New York, USA

- On behalf of the Training Working Group.

9 months ago 0 0 0 0
How To Do Flat Embedding
How To Do Flat Embedding YouTube video by Volume EM Community

๐ŸŽฅ New Video: How to Do Flat Embedding

Weโ€™re excited to share the latest video from the vEM Community! In this video, you'll learn the process of flat embedding samples for SBF-SEM, a crucial method for high-resolution imaging: www.youtube.com/watch?v=VbS2...

#volumeEM #SBFSEM #FlatEmbedding

9 months ago 1 0 1 0

The vEM Tech Forum 2026 is organized by Alice Liang (NYU Langone Health), Kun Song (Peking University) and Qiang Guo (Peking University).
We can't wait to connect with all of you there!

9 months ago 0 0 0 0
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โœจ ๐—ฆ๐—ฎ๐˜ƒ๐—ฒ ๐˜๐—ต๐—ฒ ๐——๐—ฎ๐˜๐—ฒ! โœจ

Weโ€™re excited to announce that the ๐ฏ๐„๐Œ ๐“๐ž๐œ๐ก๐ง๐จ๐ฅ๐จ๐ ๐ฒ ๐…๐จ๐ซ๐ฎ๐ฆ ๐Ÿ๐ŸŽ๐Ÿ๐Ÿ” is now officially on the calendar!

๐Ÿ“… October 12-15, 2026
๐Ÿ“ Peking University, Beijing, China

Stay tuned for more details!

9 months ago 3 0 1 0
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New insights into corneal development from vEM - FocalPlane New insights into corneal development from vEM - Volume EM

Discover how SBF-SEM (Serial Block-Face Scanning Electron Microscopy), a vEM technique, is being used to unveil new perspectives on corneal development.

Check out our new case study: tinyurl.com/54pxp6ku

Authors: Rob Young, Kiranjit Bains, Phil Lewis and Andrew Quantock - Cardiff University, UK

9 months ago 2 0 0 1
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Next Euro-Bioimaging Virtual Pub/volumeEM Series!

Join Andreas Mรผller @andimicroscopy.bsky.social from Paul Langerhans Institute, TU Dresden, for a talk on "The Exploratory Potential of Volume Electron Microscopy"!

๐Ÿ—“๏ธ June 20th, 2025
โฐ 13:00 CEST
๐Ÿ”— Register: www.eurobioimaging.eu/events/explo...

10 months ago 3 1 0 1
AI Segmentation in Volume Electron Microscopy
AI Segmentation in Volume Electron Microscopy YouTube video by Volume EM Community

๐ŸŽฅ New #volumeEM Video Alert: AI Segmentation in Volume Electron Microscopy! www.youtube.com/watch?v=nIoz...

Segmentation is key to analyzing 3D volume EM data. Learn how semantic, instance, and panoptic methods isolate structures like mitochondria, nuclei, and cytoplasm in complex tissues.

11 months ago 17 7 0 1
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empanada new version (v1.2) released!!

empanada.readthedocs.io/en/latest/ Youโ€™ll see many goodies in this release:
1. Two new models: DropNet and NucleoNet
2. Several new modules includes tiling

Enjoy and please let us know if this works for you, happy segmenting!

11 months ago 5 1 0 0
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Enabling global image data sharing in the life sciences - Nature Methods This Perspective provides a roadmap toward globally federated open data resources for bioimaging data.

๐Ÿ’กCheck out this new proposal recently published where new strategies on Global sharing of image data/metadata, AI under a global federated model are discussed.

A publication by @Antje Keppler et al.
@eurobioimaging.bsky.social

doi.org/10.1038/s415...

1 year ago 7 3 0 0