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Posts by Lisa Nicvert

Submissions for the greatest conference on open and transparent science in ecology and evolution are now open! If you have something to share, don't hesitate to submit an abstract! This year, I'm also involved in the conference organization so feel free to reach out if you have any questions 😊

6 days ago 2 0 0 0
Biodiversity in Equations advertising poster. 9-10 April, Montpellier.

Biodiversity in Equations advertising poster. 9-10 April, Montpellier.

Me in front of my poster: “Statistical methods to measure species trends from biased data”

Me in front of my poster: “Statistical methods to measure species trends from biased data”

Last week I had the pleasure to present a poster at the Biodiversity in Equations conference. A nice opportunity to exchange with great and knowledgeable people. Also the first time I formally presented our occupancy results from the DRAGON project!

1 week ago 2 0 0 0

A great article to know more about our last publication with the DRAGON project! It’s a really good summary made accessible to everyone, so don’t hesitate to read on (English version available through this link ➡️ www.fondationbiodiversite.fr/en/investiga...)

3 weeks ago 1 2 0 0
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🔊SAVE THE DATE for our 6th SORTEE conference: 13-14th Oct 2026!

Registration & content submission (unconferences, hackathons, workshops) will open soon.

Keep an👁️on sortee.org/upcoming/ #SORTEE2026

To join the mailing list for conference updates, click: docs.google.com/forms/d/e/1F...

4 weeks ago 22 18 0 0
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Logging in R Tips and tricks using the {logger} package

New blogpost about logging in R! Including: a short introduction to what logging is, what it's used for, and a few tips and tricks using the {logger} package for writing log messages to a file ⬇️
lisanicvert.github.io/posts/logging/

4 weeks ago 0 0 0 0

One for the #dragonfly feed. note the link will get you the full article for the next 50 days. #invertebrates

1 month ago 2 1 0 0

The link above should give everyone open-access for 50 days. After that, you're much welcome to contact me or any co-author to get the PDF!

1 month ago 0 0 0 0
Graphical abstract for the article

Graphical abstract for the article

Happy to share my very first article dragonflies !
We investigate how dragonflies traits are linked with their vulnerability in Europe. Our main conclusions: habitat, life cycle length and temperature preferences are the main traits linked with vulnerability.
authors.elsevier.com/a/1mnPQ1R%7E...

1 month ago 12 5 1 1
Wikipedia’s network of first links starting from 100 random articles. Interested? Find out more in the blogpost!

Wikipedia’s network of first links starting from 100 random articles. Interested? Find out more in the blogpost!

Excited to share my brand-new website, now including a blogging section! In my first post, I investigate whether all pages on @wikipedia.org really lead to Philosophy, using R and the Wikimedia API 👩‍💻

lisanicvert.github.io/posts/wikipe...

1 month ago 2 0 0 0
Phengaris teleius (Scarce Large Blue) in a French meadow. One of the 17 species in the European Grassland Butterfly Index. Photo: Martin Warren)

Phengaris teleius (Scarce Large Blue) in a French meadow. One of the 17 species in the European Grassland Butterfly Index. Photo: Martin Warren)

The latest European Grassland Butterfly Indicator is out. It shows that grassland butterflies have declined by 47% since 1991, indicating a huge loss of grassland biodiversity. The data come from 16,150 transects & 15,000 volunteers. We are calling for urgent action. www.bc-europe.eu/documents/69...

2 months ago 483 157 9 6
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Occupancy models in R – Tips and tricks

My first post on the FRB-CESAB blog 👩‍💻 nerding about occupancy models!
frbcesab.github.io/tips-and-tri...

3 months ago 4 0 0 0
Slide with my career path

Slide with my career path

Biotechnologies & Bioinformatics department at INSA

Biotechnologies & Bioinformatics department at INSA

Today I had the pleasure to go back at INSA (where I got my engineer degree in 2020) to present my career path in ecology and academia to fourth-year students of the Bioinformatics and Modelling pathway! It was super nice to share my experience 😊

3 months ago 3 0 0 0
Logo de Wikipédia stylisé sous forme de personnage de dessin animé joyeux. Le globe terrestre fait de pièces de puzzle grises et blanches avec divers caractères provenant de différents systèmes d'écriture sourit largement, avec les yeux fermés. Le coin supérieur gauche du globe présente une pièce manquante.

Logo de Wikipédia stylisé sous forme de personnage de dessin animé joyeux. Le globe terrestre fait de pièces de puzzle grises et blanches avec divers caractères provenant de différents systèmes d'écriture sourit largement, avec les yeux fermés. Le coin supérieur gauche du globe présente une pièce manquante.

Sur Wikipédia, c'est le #BlackFriday toute l'année. L'intégralité de nos articles est disponible gratuitement et sans publicité 😎.
➡️ Petit bonus : Vous pouvez vous aussi contribuer à Wikipédia et créer un compte gratuitement. Alors n'hésitez pas 😉!
w.wiki/GM$T

4 months ago 99 31 1 0

Fun fact : j’ai créé cette mascotte (Wiky), à l’occasion d’un séminaire dans notre labo (@lbbe-lyon.bsky.social) qu’on a préparé avec @flolecorvaisier.bsky.social, portant justement sur la contribution à Wikipédia !
commons.wikimedia.org/wiki/File:Ha...

4 months ago 2 0 1 0
Title slide with text:
A guide to writing good code for the busy scientist

Black text over stripey pale brown-green background

Title slide with text: A guide to writing good code for the busy scientist Black text over stripey pale brown-green background

If you missed my talk but still want some tips for writing good code for scientists, my slides are here:

daxkellie.quarto.pub/a-guide-to-w...

All the links and references are there too in case you want to see more! 😀🧪🌏

#ESA2025 #rstats #quartopub

4 months ago 87 35 1 0
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How exactly does academic authorship work? And how can we establish fairer crediting systems that recognise non-academic authors and diverse contributions?

Learn more through @oakleigh-wilson.bsky.social conversation with @sjcfishy.bsky.social for our #ECRAsks series: buff.ly/bRxxqKg

5 months ago 11 5 0 0
the galaxias hex logo showing a fun-coloured illustration of a green galaxias fish. The head, gills and fin in the centre with light green on the underside, green lips and wavy shades of green on its back, with blue and orange markings by its eye and gills. The background is light orangey-salmony colour in a sunburst style

the galaxias hex logo showing a fun-coloured illustration of a green galaxias fish. The head, gills and fin in the centre with light green on the underside, green lips and wavy shades of green on its back, with blue and orange markings by its eye and gills. The background is light orangey-salmony colour in a sunburst style

🚨Our new package {galaxias} is released in R & Python today! 🚨

📦 galaxias makes it easy to standardise data to Darwin Core, the accepted format for sharing ecological data with infrastructures like @gbif.org and the Atlas of Living Australia

galaxias.ala.org.au

#rstats #python 🧪🌏🐟

A thread 🧵👇

5 months ago 57 18 2 4
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La vie artificielle comme banc d’essai pour l’évolution moléculaire Grâce aux outils informatiques, les informaticiens peuvent aider les biologistes à retracer plus précisément l'histoire évolutive des espèces et ce, jusqu'à l'échelle moléculaire. Telle est l'ambition...

Nouvel épisode du podcast "Interstices" que j'ai fait pour l'INRIA ! 🎙️✨

Avec Eric Tanier et Vincent Daubin, on plonge dans la vie artificielle comme banc d'essai pour l'évolution moléculaire 🧬💻

Fascinant !

👀🎧 interstices.info/la-vie-artif...

#SciComm #Podcast

5 months ago 8 2 0 0

Un grand merci à @alexandradelbot.bsky.social d’avoir pris le temps de m’écouter et d’avoir fait une chronique sur notre papier pour France Culture !

6 months ago 2 1 0 0
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Wiley set to earn $44m from AI rights deals, confirms “no opt-out" for authors The US publisher is the latest to capitalise on deals to give tech firms access to its authors’ content to train their Large Language Models (LLMs).

Everybody makes money out of academic authors except the authors...News.

Wiley is the latest academic publisher to reach a multi-million deal to allow access to its content to AI developers, with no opt out, let alone payment, for the authors who created that content.

1 year ago 101 91 2 7

Very happy to share our new paper published in Current Biology !

We show that the “big bad wolf” actually fears humans for good reason.
It’s the first-ever playback experiment on wild wolves in Europe 🇵🇱🌲.

6 months ago 19 4 0 0
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Our International Postdoc Forum is a virtual seminar series for early career researchers to share their work w/commentary by MCPS community members. Excited to welcome @rosetrappes.bsky.social (University of Bergen, Norway) at 1215 CT Wed 24 Sept. Sign up for Zoom link. buff.ly/MSAXLgY

7 months ago 16 9 0 1
brown and blue graphic with white text and logos overlaying. Text reads why countries need the global biodiversity information facility: lessons from belgium

brown and blue graphic with white text and logos overlaying. Text reads why countries need the global biodiversity information facility: lessons from belgium

🌍 Why countries need GBIF: lessons from Belgium

A recently published policy brief provides details how Belgium has leveraged GBIF to support sustainable development, conservation and innovation for effective #biodiversity governance.

🔗 doi.org/10.5281/zeno...

7 months ago 13 12 0 3
Title and author list for the synthesis paper titled "Understanding and Predicting Population Response to Anthropogenic Disturbance: Current Approaches and Novel Opportunities" published in Ecology Letters.

Title and author list for the synthesis paper titled "Understanding and Predicting Population Response to Anthropogenic Disturbance: Current Approaches and Novel Opportunities" published in Ecology Letters.

The latest paper from the DISCAR synthesis group is out at Ecology Letters! We discuss the key approaches to predicting human impacts on wildlife populations, highlighting avenues for incorporating indirect effects, such as energetic modelling. doi.org/10.1111/ele....

7 months ago 52 26 2 2

It was a pleasure to attend and speak at this great conference! @ecobhvr2025.bsky.social

8 months ago 3 0 0 0
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Disability in ecology and evolution In this TrendsTalk series 'Disability in ecology and evolution' in Trends in Ecology and Evolution, we will be hearing from people about their experiences being disabled in ecology and evolution. We a...

Huge thank you @aeastephens.bsky.social‬ for initiating the TrendsTalk series 'Disability in ecology and evolution' in T.R.E.E. providing visibility for disabled researchers in #Ecology & #Evolution to make our field more #inclusive www.cell.com/trends/ecolo...

8 months ago 37 19 0 1

Also, you can read this post which describes our findings! bsky.app/profile/lisa...

9 months ago 0 0 0 0

Our article is now out in Peer Community Journal! If you are interested in network ecology, trait matching or multivariate methods, read it here (in open access) ⬇️
🌐

9 months ago 7 0 1 0
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So nice to talk about science together!

9 months ago 0 0 0 0
Trait matching without traits: using correspondence analysis to investigate the latent structure of interaction networks Species interactions in ecological communities are often represented as networks, the structure of which is thought to be linked to species' interaction niches (or Eltonian niches). Interaction niches are intimately related to the notion of trait matching, which posits that a species interacts preferentially with partners whose traits are complementary to their own. Multivariate methods are commonly used to quantify species environmental niches (or Grinnellian niches). More recently, some of these methods have also been used to study the interaction niche, but they consider only the niche optimum and require trait data. In this article, we use the correspondence analysis (CA) framework to study interaction networks and investigate trait matching without requiring trait data, using the notion of latent traits. We use reciprocal scaling, a method related to CA, to estimate niche optima and breadths, defined respectively as the mean and standard deviation of the latent traits of species' interacting partners. We present the method, test its performance using a simulation model we designed, and analyze a real frugivory network between birds and plants. The simulation study shows that the method is able to recover niche breadths and optima for data generated with parameters typical of ecological networks. The birds-plants network analysis shows strong relationships between species latent traits and niche breadths: a posteriori correlation with measured traits suggests that birds and plants of intermediate size tend to have the broadest niches. Additionally, birds preferentially foraging in the understory have broader niches than birds preferentially foraging in the canopy. CA and reciprocal scaling are described as fruitful exploratory methods to characterize species interaction profiles, provide an ecologically meaningful graphical representation of interaction niches, and explore the effect of latent traits on network structure. ### Competing Interest Statement The authors have declared no competing interest. Agence Nationale de la Recherche, ANR-18-CE02-0010 (project EcoNet)

Many thanks to PCI (@peercommunityin.bsky.social) Ecology for a smooth revision process, and to the reviewers @ibartomeus.bsky.social and Pedro Henrique Pereira Braga. Read the full article here: doi.org/10.1101/2024... (to be published in Peer Community Journal soon) (6/6)

9 months ago 4 0 0 0