Linker histone H1 functions as a liquid-like glue, dynamically holding nucleosomes together, and keeping chromatin fluid and accessible
to organize chromatin in living human cells | Science Advances
www.science.org/doi/10.1126/...
Posts by Nilimesh Das
Glad we could contribute to this beautiful work from Claire Dudley et al! I remain forever in awe of Dr. Daniel Foust’s amazing data visualization skills.
Fluorescence Lifetime-Based FRET Biosensors for Monitoring N Terminal Domain-Dependent Interactions of TDP-43 in Living Cells: A Novel Approach for ALS and FTD Drug Discovery | ACS Chemical Neuroscience pubs.acs.org/doi/10.1021/...
Last day to register for the SMC meeting 2026!
Lipid-conjugated DNA enables on-demand delivery of lipids and proteins to synthetic cells
doi.org/10.64898/202...
Condensates are powerful ways to break symmetry and cells do remarkable things with them. Here we show that in a multinucleate fungus, a condensate regulates translation of a cyclin and a formin in distinct locations.
www.nature.com/articles/s41...
Algal pyrenoids—condensates that mediate ~1/3 of Earth’s CO2 fixation—change size and number as cells divide. Our data suggest a simple control mechanism: a kinase that continuously ejects material from the condensate! ☀️🌍🔬💧 #Biophysics #Photosynthesis
www.biorxiv.org/content/10.1...
Biomolecular condensates as cellular memory modules: Thermodynamic principles and plant stress adaptation: Biophysical Journal www.cell.com/biophysj/ful...
Structural Heterogeneity and Hydrodynamics of an Intrinsically Disordered Protein Condensate | Journal of the American Chemical Society pubs.acs.org/doi/10.1021/...
How does a riboswitch regulate genes?
glycine tandem riboswitch follows a stepwise 5’ to 3’ folding pathway guided by polymerase pausing and stepwise ligand binding, leading to cooperativity through non-equilibrium mechanisms, not classical concerted model.
www.nature.com/articles/s41...
RNA-binding protein MYC binds to nascent, intronic RNA.
It then forms multimers, and suppresses the accumulation of R-loop to prevent innate immune signalling: Cell www.cell.com/cell/fulltex...
HS-AFM revaealed the architecture of CaMKIIα/β, a protein essential for memory!
Dynamic HS-AFM imaging shows how α and β subunits mix and stabilize the active state.
rdcu.be/e3VCP
Non-specific interaction plays a big role on how selectivity emerges in cells!!
Intrinsically disordered regions power the search facilitating initial non-specific association with DNA to find promoter.
rdcu.be/e0mIF
🚨 Excited to share our new preprint: Stag2 dependent chromatin remodeling enforces the erythroid-specific Gata1 cistrome. This work was led by Columbia VP&S MD student Varun Sudunagunta (‼️ Program Directors: Varun is applying to IM residencies this year!) www.biorxiv.org/content/10.1...
Confocal scanning laser microscopy, fluorescence lifetime imaging & Raman analyses allowed @nhm-london.bsky.social, @slcuplants.bsky.social & @cambridge-ee.bsky.social researchers to resolve plant & fungal structures fossil
Read in @newphyt.bsky.social
doi.org/10.1111/nph....
@dromius.bsky.social
Protein aggregation in cells can start at nanomolar levels as tiny clusters that are hard to see with standard methods. This study uses fluorescence correlation spectroscopy to spot and study these invisible early aggregates.
www.growkudos.com/publications...
In aged condensates, weaker protein–RNA interactions release RNA from the dense phase. Aging plus slow macromolecular diffusion then tarts nucleatiin, producing double-emulsion.
Formation of multi compartment structures through aging of protein-RNA condensates: www.cell.com/biophysj/ful...
Cryo-EM snapshots of Wadjet show how ATP fuels a 360° dimer rotation to trap DNA and set the stage for loop extrusion
You don't need all 20 amino acids to build proteins! Here, authors showed
a reduced 10-amino-acid alphabet form exceptionally stable and resistant to mutations proteins!!
A key insight into the #OriginOfLife and a new foundation for minimalist #ProteinDesign.
www.biorxiv.org/content/10.1...
Diagram to represent the interrelated factors involved in the photo-regulatory mechanisms of Arabidopsis CRY complexes. Dual mechanisms of action, including the “Lock-and-Key” and the “Liquid-Liquid Phase Separation (LLPS)” mechanisms, explain, at least partially, the structural diversity of CRY-interacting proteins and the functional diversity of the CRY photoreceptors.
💪 Small but mighty! This JIPB mini-review explores the remarkable dual-action mechanism of #Arabidopsis cryptochromes. PlantScience onlinelibrary.wiley.com/doi/10.1111/...