Hi, cool work! I found it from the title, but the link is to a different paper...
Posts by Débora Y C Brandt
Super excited to be launching two things today: #RustQC 🦀🧬 and rewrites.bio 🚀
I used AI to rewrite 15 RNA-seq QC tools into a single Rust binary (I've never written any Rust). It ended up being over 60x faster. Here's the story 🧵
seqeralabs.github.io/RustQC/
Our paper is on the cover of @currentbiology.bsky.social : a strawberry poison frog with the most common color morph, living up to its common name 🍓. In this issue, we uncover the genetic basis of color variation in frogs from Bocas del Toro, where blue, green, yellow, orange, and red morphs occur
Fantastic seminar from @deboraycb.bsky.social discussing some of the challenges and limitations of detecting balancing selection from genomic data and her ongoing work on developing a new ARG-based approach.
See preprint here: www.biorxiv.org/content/10.6....
Spread the word! UChicago BSD is currently searching for an instructional professor (open rank) to help develop and support graduate training in quantitative biology at UChicago. This is an Instructional Professor position (open rank). apply.interfolio.com/183517.
Join our department (GEE) as a fellow - Research Career Development Fellowships Program Call: tinyurl.com/2sfpyhsz
GEE invites #ECRs who wish to be sponsored to apply for external fellowships to establish an independent research group. @ucllifesciences.bsky.social
More info: tinyurl.com/mtwhwzjj
Reminder: Early bird registration for SMBE 2026 ends March 31. Join us in Copenhagen from June 28-July 2 for top speakers and diverse topics. Register here: www.smbe2026.org/registration/ #conference
Escrever dói! 📝 Nesse novo ep falamos sobre o sofrimento na escrita acadêmica. Entender o significado da frase: “Não escrevo pra falar o que eu sei, escrevo pra descobrir o que eu tenho a dizer“. Dá o play e passa pra alguém que está escrevendo nesse momento. ✍️
open.spotify.com/episode/70zk...
Obrigada @alociencia.bsky.social! Veio num momento ideal pra mim ❤️
open.spotify.com/episode/70zk...
A digital CAPTCHA verification window titled "Select all squares with PIPES" against a plain white background. The window contains a 3×3 grid of numbered squares, mixing literal hardware, smoking pipes, and programming syntax.
These captchas just keep getting harder #rstats
Job alert: open position for a Professor or Associate Professor of Computational Genomics in Health and Disease at University College London.
Based in the Department of Genetics, Evolution and Environment of UCL, and UGI, and funded by the UCL Health Strategy.
www.ucl.ac.uk/work-at-ucl/... 🧪
AI agent goes nuts on open source maintainer after having its pull request denied. This is a pretty insane story. Open source development as we've been used to for the last few decades is likely over. 1/
theshamblog.com/an-ai-agent-...
anyone know if there is childcare at @official-smbe.bsky.social 2026 this year? #SMBE2026
RESEARCH ARTICLE:
Early diet leaves a lasting mark! Mismatched mitochondrial + nuclear genes slow fly development & shift adult food choices. G×E shape metabolism & behaviour:
doi.org/10.1093/jeb/...
@stefanobettinazzi.bsky.social et al. (2025)
@fcamus.bsky.social
@dk-dowling.bsky.social
A new preprint from the lab, with postdoc @deboraycb.bsky.social and collaborators @aidaandres.bsky.social and Tim Connallon:
“Characterising the detectable and invisible fractions of genomic loci under balancing selection”
www.biorxiv.org/content/10.6...
Balancing selection maintains some remarkable biological diversity, but detecting it from genomic data alone can be tricky. This may bias our view of its true prevalence. We investigated what makes balancing selection more or less detectable in genomic scans. + in thread & preprint!
Balancing selection alert!! 🧬🧪
New preprint where we try to quantify how likely (or rather, unlikely) it is for balancing selection to maintain stable polymorphism, and how easy (or rather, challenging) it is to identify its signatures in genomes.
#Popgen #MolecularEvolution #EvoBio #Science
Balancing selection maintains some remarkable biological diversity, but detecting it from genomic data alone can be tricky. This may bias our view of its true prevalence. We investigated what makes balancing selection more or less detectable in genomic scans. + in thread & preprint!
Remember to submit your abstract and your award application for SMBE 2026 in Copenhagen by February 3.
❗Just two weeks to go!
Please remember to submit your abstract and award application for SMBE 2026 in Copenhagen by February 3.
📨 Abstract submission & Award applications
smbe2026.org/abstracts
📋 Programme details
smbe2026.org/programme
#SMBE2026
We are excited to share our recent work on the surprising robustness of Ancestral Recombination Graph (ARG) inference tools to computational phasing errors, now available on BioRxiv: biorxiv.org/content/10.1....
This work is co-advised by @yundeng.bsky.social and Rasmus Nielsen.
1/7
Uau parabéns!!!
And we are LIVE! Join us for Day 1️⃣
www.youtube.com/watch?v=rP0X...
#conference #genomics #ERGA @biogeneurope.bsky.social
HHMI adopts Plan U journals.plos.org/plosbiology/...
Um pequeno pássaro azul brilhante com pernas e pés amarelos brilhantes está empoleirado em um galho. Ele tem uma mancha preta no peito e no abdômen. O fundo é verde borrado. Atenção: O alt da imagem foi gerado automaticamente.
🇧🇷Saí-de-perna-amarela
🌎Cyanerpes caeruleus
Conservação:Pouco Preocupante
A saí-de-perna-amarela é um Passeriforme da família Thraupidae.
📷 Ester Ramirez
Important heads up! This is crazy
depois de dois anos da primeira tira, completando agora com o personagem abrindo a latinha de cerveja que deve tá quente já mas fodase, bolsonaro condenado cuida pai sextou
PODE JÁ!!
Jasmin Rees PhD chapter as a paper just out at the AJHG @ajhgnews.bsky.social, with Sergi Castellano, who first envisioned the study. Jas investigated signatures of human local genetic adaptation in hundreds of micronutrient-associated genes.
SINGER, our ARG inference method, is finally published and freely available online:
doi.org/10.1038/s415...
It was a long journey – 16 months from initial submission to acceptance. Is it just me, or has peer review gotten more arduous lately? 4+ rounds of review isn't so unusual these days...
SMBE2026 - Call for Symposia Proposals
📢 The Call for Symposia for SMBE2026 is now open. We warmly invite you to submit a symposium proposal and help shape the scientific content of our annual meeting.
🗓️ Key dates
Call for symposia: Sep. 1 - Oct. 15
Announcement of accepted symposia: Nov. 3
More information: smbe2026.org/symposia
Excited to share our new preprint🙌
It's the first human WGS study in Sudan. We uncover one of the strongest selection signals to date, pointing to post-admixture adaptation to malaria in Copts. Huge thanks to all co-authors. @aidaandres.bsky.social @jgarcia-cal.bsky.social @ebosch1972.bsky.social