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Posts by Alex Cagan

Polyclonal selection of immune checkpoint mutations in thyroid autoimmunity Nature - Polyclonal selection of immune checkpoint mutations in thyroid autoimmunity

Excited to share our latest work in Nature. Applying single-molecule and single-cell DNA sequencing methods, we uncover an extraordinary landscape of somatic mutations in immune checkpoint genes in autoimmune B cells, suggesting that somatic mutations may be key to autoimmunity [1/n] rdcu.be/fdqbr

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Carl de Boer on understanding the evolution of gene regulatory complexity and its role in complex disease #MITS2026

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Isidro Cortes-Ciriano on small molecule cell-free DNA sequencing at national scale #MITS2026

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@nevillesanjana.bsky.social

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Neville Sanjana on scalable methods to determine the function of noncoding DNA and RNA #MITS2026

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Polyclonal selection of immune checkpoint mutations in thyroid autoimmunity - Nature Nature - Polyclonal selection of immune checkpoint mutations in thyroid autoimmunity

Paper here www.nature.com/articles/s41...

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A whole new world… Inigo Martincorena presents paradigm shifting work showing a key role for somatic evolution in autoimmune disease. Long-term, polyclonal, multistage evolution #MITS2026

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Nicole Lake on constraint in mitochondrial genomes with insights into health and evolution #MITS2026

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Amanda Larracuente on meiotic drive and satellite DNA in drosophila #MITS2026

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Talks exploring the heritability of mutational processes and inferring de novo mutation rates across primates #MITS2026

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Evan Eichler on using near-complete human genomes to more fully understand mutational processes #MITS2026

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Talks on selection in sperm and population differences in germline mutational processes #MITS2026

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Siyao Wang on transgenerational inheritance of DNA damage and sex specific effects #MITS2026

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Hakon Jonsson on insights into de novo genetic variation and genetic causes of pregnancy loss #MITS2026

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Diverse mutational patterns between neuronal populations in the cerebellum #MITS2026

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Talks on heterozygosity induced de novos and new indel mutational signatures at #MITS2026

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Two more talks on single cell resolved clonal haematopoiesis research and using methylation patterns to study clonality #MITS2026

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Caroline Watson gives the first talk at the Mutations in Time and Space conference on the evolutionary road to AML #MITS2026

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Delighted to have contributed a comment piece and the cover illustration to a @natecoevo.nature.com focus issue on "Evolution in medicine".
I discuss how the emerging field of somatic evolution is providing new opportunities to understand disease and promote healthy ageing doi.org/10.1038/s415...

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Thanks Matt!

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Curious Cases - Series 24 - Immortal Jellies - BBC Sounds Hannah Fry and Dara Ó Briain ask whether a tiny jellyfish holds the secret to immortality.

Thrilled to announce that I'm on Curious Cases tomorrow at 10am on BBC Radio 4!

The episode - Immortal Jellies - looks at some remarkably long-lived species and what they can teach us about ageing. This is a key area of focus for our lab.
www.bbc.co.uk/sounds/play/...

5 months ago 11 4 1 1
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Julie Ahringer from @gurdoninstitute.bsky.social @geneticscam.bsky.social @cam.ac.uk gives talk on decoding genome regulation during development. Exploring how chromatin accessibility changes throughout development enable single cells to become multicellular organisms.

5 months ago 31 12 0 0

This is a fantastic opportunity to do exciting research on comparative somatic evolutionary genomics as part of a great team. I've collaborated with Peter for many years and highly recommend this position! Please email Peter if you'd like to learn more, including a copy of your CV.

8 months ago 2 1 0 0

Love seeing methodical comparisons of preservation protocols like this! Great to know for the future

9 months ago 2 0 0 0

night science

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Thanks @trevorgraham.bsky.social it was an honour to participate in this great workshop with such an engaged and diverse cohort in a rapidly growing community

9 months ago 1 0 0 0
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Closing keynote from the fabulous @atjcagan.bsky.social on "The impossibility of whales" discussing somatic mutagenesis across species. Brilliantly delivered and exceptionally illustrated talk, as anyone who knows Alex's work would expect! #EBECancer25
@eventswcs.bsky.social

9 months ago 4 3 1 0

Thanks @amyboddy.bsky.social for the invitation to run this workshop on where ideas come from in science, barriers to creativity and how to overcome them. Great discussion from the group! I'm a convert to 'night science' @urialonlab.bsky.social

9 months ago 6 1 0 0
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The Somatic Mosaicism across Human Tissues Network @nature.com @timcoorens.bsky.social
www.nature.com/articles/s41...

9 months ago 5 2 0 0
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A signature-agnostic test for differences between tumor mutation spectra reveals carcinogen and ancestry effects Mutational signatures contain valuable information about the mutational processes shaping cancer genomes. However, despite dozens of tools to identify signatures in cancer samples, there is not an est...

If you’ve ever wondered about the statistical significance of differences among mutational signature profiles, check out our new Aggregate Mutation Spectrum Distance (AMSD) preprint co-led by Sam Hart and @alisonfeder.bsky.social with @nalcala.bsky.social www.biorxiv.org/cgi/content/...

11 months ago 33 11 1 2