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Posts by Typhaine Paysan-Lafosse

Looking forward to presenting our latest work in Pfam at @jobim2025.bsky.social this week!

9 months ago 2 0 0 0

Want to use the InterPro API but not sure how to start? Join this upcoming workshop, where @typhainepl.bsky.social will guide you through the fundamentals and practical applications. Discover how to integrate this powerful tool into your workflow! Register now to secure your spot. 💻🧪

1 year ago 4 2 0 0
InterProScan Version: 5.73-104.0
6th February 2025

InterProScan Version: 5.73-104.0 6th February 2025

Databases updates:
Pfam 37.2
NCBIfam 17.0
CDD 3.21

Databases updates: Pfam 37.2 NCBIfam 17.0 CDD 3.21

Ways to access:
1) InterPro website: sequence search
2) Local installation
Software download
Docker container

Ways to access: 1) InterPro website: sequence search 2) Local installation Software download Docker container

🆕 New version of InterProScan: 5.73-104.0
3 ways to use it:
1️⃣ Sequence search on the InterPro website: ebi.ac.uk/interpro/sea...
2️⃣ Local installation: interproscan-docs.readthedocs.io/en/v5/Instal...
3️⃣ Local installation using a container: interproscan-docs.readthedocs.io/en/v5/HowToU...
💻🧪

1 year ago 3 3 0 0
InterPro 104.0
6th February 2025

InterPro 104.0 6th February 2025

Databases udpates:
Pfam 37.2, NCBIfam 17.0, CDD 3.21

Databases udpates: Pfam 37.2, NCBIfam 17.0, CDD 3.21

661 new entries, containing:
663 Pfam 
5 NCBIfam
5 PANTHER 
9 CDD

661 new entries, containing: 663 Pfam 5 NCBIfam 5 PANTHER 9 CDD

New features:
Redesigned protein viewer for sequence searches
Wikipedia articles for Pfam clans
Addition of PTM from the PRIDE database

New features: Redesigned protein viewer for sequence searches Wikipedia articles for Pfam clans Addition of PTM from the PRIDE database

🔈InterPro release 104.0 is live!
✨Update to Pfam 37.2, NCBIfam 17.0, CDD 3.21.
✨661 new entries, including 682 signatures from the Pfam (663), NCBIfam (5), PANTHER (5), CDD (9) databases. Have a look: ebi.ac.uk/interpro/ 💻🧪

1 year ago 3 4 0 0
Parkinson's disease molecular mechanisms.
Source: https://www.thelancet.com/journals/lancet/article/PIIS0140-6736(14)61393-3/fulltext#fig3

Parkinson's disease molecular mechanisms. Source: https://www.thelancet.com/journals/lancet/article/PIIS0140-6736(14)61393-3/fulltext#fig3

🧬🧪💻 New blog post: Diving deep into the key proteins behind Parkinson's disease. From α-synuclein to LRRK2, we're unravelling the molecular mysteries that could hold the key to treatment breakthroughs. Read more: proteinswebteam.github.io/interpro-blo... #Parkinsons #Neuroscience

1 year ago 3 1 0 1