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Posts by Carl D. Modes

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TopoSPAM: Topology grounded Simulation Platform for morphogenesis and biological Active Matter We present a topology grounded, multiscale simulation platform for morphogenesis and biological active matter. Morphogenesis and biological active matter represent keystone problems in biology with ad...

🤩👍🏼💪🏼 Meet #TopoSPAM - a high-performance simulation platform for biological morphogenesis with a friendly Python interface. @tudresden.bsky.social @csbdresden.bsky.social @mpi-cbg.de. Solve both continuous and discrete active mechanics! Released today: arxiv.org/abs/2509.24905

6 months ago 18 6 1 0

So happy to see the cephalic furrow combo out back-to-back! This was a wonderful collaborative endeavor 🥹

7 months ago 34 5 8 0
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The moral of the story is that building the #bridge between #evolution & #morphogenesis is hard. I still think it needs a concerted push, because, to paraphrase the classic: "Everything in biology, even the #CF, starts making sense in the light of evolution." I add, it is #stuff_that_matters (12/12)

7 months ago 20 6 1 1
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We are all super happy and proud to see our work on the function and evolution of the #cephalic #furrow published in @nature.com. Let me say a few things about the background and history of this work on the #Evolution_of_Morphogenesis (1/12)

7 months ago 348 118 16 8
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Mechanical forces drive evolutionary change A small tissue fold present in fruit fly embryos buffers mechanical stresses and may have evolved in response to mechanical forces.

Dresden researchers @paveltomancak.bsky.social @bruvellu.bsky.social, Carl Modes, @cuencam15.bsky.social ‬ & colleagues published in @nature.com that a tissue fold in fruit fly embryos buffers mechanical stresses & may have evolved in response to mechanical forces. www.mpi-cbg.de/news-outreac...

7 months ago 81 30 3 3

Fantastic interaction with @carldmodes.bsky.social
and @liormoneta.bsky.social , who did all the modelling. It was great to work in such an interchangeable setting between biology and physics, to lear about #ShapeProgramming and shed a little more light on how organs gain their 3D shape.

7 months ago 2 1 0 0
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The Optic cup is actively shape programmed by independently patterned apical forces During morphogenesis, initially flat tissues often must transition into complex 3D shapes, reminiscent of shape-programmable systems in physics and engineering. One key question in developmental biolo...

I am thrilled to share the main result of our work at @nordenlab.bsky.social with @liormoneta.bsky.social and @carldmodes.bsky.social . We bridged DevBiology + theoretical physics to understand how the eye becomes round #morphogenesis #devbio #biophysics #zebrafish www.biorxiv.org/content/10.1...

7 months ago 36 14 1 0
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Thanks André! And hello Bluesky world!

7 months ago 3 0 0 0

Thanks for the arm twist, @nordenlab.bsky.social !

7 months ago 1 0 0 0