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Posts by Nathan Clark

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1 month ago 0 0 0 0
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The ggpubfigs package just got more stable. Now, every time the code updates, it’s automatically tested on older, current, and development versions of R—which you can see on the green badge. I officially support R versions 4.4, 4.5, and the latest development release. (1/2)

2 months ago 6 2 1 1
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Opinion | How a Conservative Texas District Rejected the Politics of Division Many Americans are growing both exhausted and frightened by Trump’s scorched-earth, hyperpartisan, fire-ready-aim approach to the presidency.

In @nytopinion.nytimes.com

“A lot of Americans are tired of being pitted against their neighbors and hunger to be brought together for a common purpose; they want common-sense solutions and to preserve our most cherished public institutions,” our columnist Thomas Friedman writes.

2 months ago 137 24 12 0

Evolutionary Rate Covariation (ERC) analysis finds new Plasmodium protein involved in red blood cell invasion.
An online resource and study with @helenahopson.bsky.social and @ellenleffler.bsky.social Paul Sigala and Jordan Little

2 months ago 1 0 0 0

Testing for positive selection *specific* to a set of foreground branches. A purpose-made method with Sergei Pond, @averyselberg.bsky.social, and Maria Chikina.

2 months ago 1 0 0 0

Such a cool study!

2 months ago 0 0 0 0
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The Extinction of Truth Or, a Colossal Pile of Bullshit

Sigh. The #ColossalBio #DeExtinction #DisInformation campaign appears to be kicking into gear again — so too shall my truth telling. It’s a scam. 🧪 🐺 🦣

substack.com/@devoevomed/...

3 months ago 19 7 0 0
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Please find attached the annual progress report for our federal grant.

3 months ago 9 0 1 0
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Thanks for this.
How does the affect the GWAS for diseases in which ~1% was explained? Do those diseases have also very low heritability? Or were the studies underpowered?

5 months ago 2 0 0 0

Wow A good explanation!

5 months ago 5 1 0 0
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PhyloWeaver – Interactive phylogenetic tree editor Edit and visualize phylogenetic trees directly in your browser. PhyloWeaver lets you interactively rearrange tree topologies and export high-quality figures for publications and presentations.

I’ve released a tool to sketch and edit phylogenetic trees!
yawak.jp/PhyloWeaver/

Load a Newick file and intuitively add/remove/resize branches.
Useful for quick conceptual trees, extracting subtrees, or turning ideas into Newick.

5 months ago 145 74 4 1

Thanks!
Still too high!

5 months ago 0 0 0 0

First time homebuyer? Probably not.
What’s the age for first time buyers?

5 months ago 1 0 1 0

How inführerating!
Probably an uninformed editor overriding the author.

5 months ago 3 0 0 0

I confirmed with the organizer of the Evomics workshops that we will be *unable* to extend the registration date.

Please ensure your seat and register before November 15 :)
bsky.app/profile/jlst...

5 months ago 3 2 0 0

Looking forward to presenting but also learning from others!

5 months ago 4 0 1 0
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Come join the workshop!
Apply here: evomics.org/apply-worksh...
bsky.app/profile/jlst...

5 months ago 17 8 0 0
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Excited to share this work, out today in MBE! In polar fishes, we found that antifreeze protein genes expanded in copy number at low temperatures and contracted in the deep sea, highlighting a role of depth and pressure in AFP evolution.

🔗 academic.oup.com/mbe/article/...

6 months ago 44 18 2 5

When the justice system and the rule of law is being called "terrorism". I'm certainly terrified!

6 months ago 1 0 0 0

Exactly. Resist!

6 months ago 1 0 0 0
Phylogenomic Approaches to Study Adaptive Evolution in Mammals: From Aging to Aquatic Lifestyles | Annual Reviews The natural world is full of valuable lessons about genetic adaptation as organisms respond to changing conditions around them. Deciphering these changes is a major goal of evolutionary genetics. Adva...

Our Annual Reviews article is finally out!
We aimed to capture a lot of comparative genomics in mammals, while pointing out challenges and new directions.
With @ekopania.bsky.social

6 months ago 3 1 0 0
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a black laptop is floating in the air with clouds behind it ALT: a black laptop is floating in the air with clouds behind it

When my out-of-office email hits your inbox and you have one set too, why doesn’t it result in an infinite out-of-office emailing loop?

6 months ago 2 0 1 0
G.400 - PHS 398 Research Plan Form

"letters necessary to demonstrate the support of consortium participants and collaborators such as Senior/Key Personnel and Other Significant Contributors included in the grant application"
grants.nih.gov/grants/how-t...

6 months ago 0 0 0 0
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Grant writers of the NIH kind:
Did you know the grant guide asks for Letters of Support from *all* senior personnel, Co-Is, etc...?
I have never done this! Have you? I had no idea, just assumed they're funded on the grant and helped write it, so why?

6 months ago 0 0 1 0

Congrats, Jacob!
(also, is it wrong to italicize latin phrases?)

6 months ago 1 0 1 0

Reupping support for journalism outlets not beholden to corporate interests. When everything is a commodity, it's worth asking where your news is coming from.

What are your favorites? Mine are @apnews.com @propublica.org @theguardian.com @pbsnews.org @motherjones.com @haaretzcom.bsky.social

7 months ago 55 8 7 0

@ekopania.bsky.social

7 months ago 1 0 0 0
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Congrats to lab postdoc, Dr. Emily Kopania, on being selected for a Catalyst Award from the Center for Evolutionary Biology and Medicine! Her project will develop a Virtual Reality experience demonstrating to students how other species see the world through their differing visual systems.

7 months ago 11 0 1 1
7 months ago 2 0 0 0

It's ridiculous and sad

7 months ago 0 0 0 0
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