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Posts by Ana Serra Silva

Join us and our fellow European systematics associations in Uppsala, Sweden for the 4th BioSyst.EU meeting!

Dates: August 17-19, 2026

Abstract submission and early bird deadline: May 31st

Registration deadline: July 17th

Details: www.trippus.net/BioSyst2026

We hope to see there!

#BioSystEU2026

4 days ago 0 2 0 0
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Ephippodonta lunata At barely 1 centimeter long, Ephippodonta lunata looks nothing like a typical clam. Most clams survive by snapping their shells tightly shut for protection, but the mysterious moon clam remodeled its....

Hey folks! Mollusc of the Year just opened up! I'm part of a working group from around the world studying the mysterious and beautiful galeommatoids, and one of our beasties is up for the MOTY! Help us out and VOTE EPHIPPODONTA!! @oceanspecies.bsky.social www.unitasmalacologica.org/ephippodonta...

1 week ago 9 3 1 2

I might like hats a tad too much...

Spent longer than I care to admit staring at this tree, cataloguing ahem dubious decisions...

But the most egregious... Stetson is a brand not a hat type! And I'm fairly sure they don't (usually) make bicorns/tricorns... 🤔

Now back to actual phylogenies.

3 weeks ago 0 0 0 0
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LinneSys: Systematics Research Fund LinneSys: Systematics Research Fund The Councils of The Linnean Society of London and The Systematics Association jointly administer this fund for the benefit of systematics research. The Fund has …

📢📢REMINDER LinneSys applications closes TOMORROW Friday, March 27th at 23:59 GMT+1!!!📢📢

Apply now! systass.org/linnesys/

Do remember to join the @systassn.bsky.social or the @linneansociety.bsky.social as a member first!

Also, we only fund taxonomy and systematics related projects!

3 weeks ago 1 2 0 3
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a cartoon cat says " for shame " while walking ALT: a cartoon cat says " for shame " while walking

Ooops, I spend so much time hassling @systassn.bsky.social members to renew their memberships and didn't realise I've been in arrears in another society for almost a year...

Oh, the shame!

4 weeks ago 0 0 0 0
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LinneSys: Systematics Research Fund LinneSys: Systematics Research Fund The Councils of The Linnean Society of London and The Systematics Association jointly administer this fund for the benefit of systematics research. The Fund has …

📢📢REMINDER LinneSys applications close this Friday, March 27th at 23:59 GMT+1!!!📢📢

Apply now! systass.org/linnesys/

Do remember to join the @systassn.bsky.social or the @linneansociety.bsky.social as a member first!

Also, we only fund taxonomy and systematics related projects!

4 weeks ago 2 4 0 0
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LinneSys: Systematics Research Fund LinneSys: Systematics Research Fund The Councils of The Linnean Society of London and The Systematics Association jointly administer this fund for the benefit of systematics research. The Fund has …

The deadline for this year's LinneSys approaches!

You have until Fri, March 27th at 23:59 GMT+1

If you're looking for a small grant for systematics work, get your application in ASAP systass.org/linnesys/

Just become a member of the @systassn.bsky.social or the @linneansociety.bsky.social first!

1 month ago 6 9 1 0
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So you are using IQ-TREE to estimate a tree for "deep time" phylogenetics using amino acid alignments. There is a lot of confusion about how to test model fit. Here are some suggestions.

1 month ago 68 37 1 2

I have zero interest in French football teams but invariably know when PSG wins.

Why? Because the fans congregate at the nearby pub and make a racket...

Tonight, in additon to the usual football crowd noises, there's drums 🙄

1 month ago 0 0 0 0
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LinneSys: Systematics Research Fund LinneSys: Systematics Research Fund The Councils of The Linnean Society of London and The Systematics Association jointly administer this fund for the benefit of systematics research. The Fund has …

Looking for a small grant for systematics work? Check us out! systass.org/linnesys/

Deadline is MARCH 27 at 23:59 GMT+1

All you need is to be a member of the @systassn.bsky.social or the @linneansociety.bsky.social

Caveat, legally, we cannot fund anyone in these countries:
tinyurl.com/wemwtfrz

1 month ago 4 8 0 0
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It's #WorldBookDay. I did a #book. It's about #frogs. Buy it. *You'll like it: tell your friends (*phrase stolen from Huey Morgan)

1 month ago 4 1 0 0
Cover image of paperback edition of the Tree of Life book by Max Telford.

Cover image of paperback edition of the Tree of Life book by Max Telford.

On world book day might you be tempted to preorder the paperback edition of The Tree of Life?

Out in pb on April 23rd.

www.amazon.co.uk/Tree-Life-So...

1 month ago 17 8 0 0

The omission of circular monstrosities is reason enough to add this to the ever growing list of 'new toys to try'.

1 month ago 3 0 0 0
Vessel tracking map for Globe40 regatta showing Cape Horn region.

Vessel tracking map for Globe40 regatta showing Cape Horn region.

If I ever drop off the map, this isn't a bad place to come looking. Weather permitting... ⛵

Do expect maniacal laughter, though.

To this day, I don't know if my skipper was more afraid of rough weather or my undisguised glee in said weather... (Beaufort up to 6/7, I do have some sense...)

1 month ago 0 0 0 0
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Hmm, now I remember why I had stopped using Duoling (besides the gamified everything...). The bloody owl won't leave me alone! 😖

1 month ago 1 0 0 0
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LinneSys: Systematics Research Fund LinneSys: Systematics Research Fund The Councils of The Linnean Society of London and The Systematics Association jointly administer this fund for the benefit of systematics research. The Fund has …

The 2026 LinneSys call is open!

Looking for a small grant for systematics work? Check us out! systass.org/linnesys/

All you need is to be a member of the @systassn.bsky.social or the @linneansociety.bsky.social

Caveat, legally, we cannot fund anyone in a country listed here: tinyurl.com/wemwtfrz

2 months ago 14 18 1 1
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Something tells me you might enjoy this room. Well contents at least, from a curatorial point of view there might be plenty of silent screaming. (I know I had some with the fish and bird collections...)

Photo belongs to the Aquario Vasco da Gama, Dafundo PT

2 months ago 1 0 1 0

Indeed, they have. Rather baffling how our closing paragraphs were reintrepreted.

Thank you! It was quite interesting to see the results taking shape.

2 months ago 0 0 0 0

Ah, I might appreciate the quote more if some creationists hadn't latched on already....

2 months ago 0 0 1 0

And thanks!

2 months ago 1 0 0 0

Not extensively but we did look at quartet scores in Astral and most interphylum scores were close to a 1:1:1 ratio.

2 months ago 1 0 0 0
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Unrooted phylogenetic tree showing (Brachiopoda,Mollusca,(Annelida,(Platyhelminthes,Nemertea)))

Unrooted phylogenetic tree showing (Brachiopoda,Mollusca,(Annelida,(Platyhelminthes,Nemertea)))

TLDR: We found very weak support for the (Brachiopoda,Mollusca,(Annelida,(Platyhelminthes,Nemertea))) tree. We do not know where the root of Spiralia goes. The spiralian phyla appeared in a very hard to resolve rapid radiation.

(7/7)

2 months ago 4 1 1 1
15-unrooted topologies showing Spiralian relationships with coloured barplots for the proportion of bootstrap and jackknife replicates supporting each unrooted tree.

15-unrooted topologies showing Spiralian relationships with coloured barplots for the proportion of bootstrap and jackknife replicates supporting each unrooted tree.

This still left the question of the internal spiralian relationships.

A combination of bootstrapping, jackknifing and simulations generally preferred one tree (Brachiopoda,Mollusca,(Annelida,(Platyhelminthes,Nemertea))).

BUT this tree was NOT significantly preferred over alternatives.

(6/7)

2 months ago 1 1 1 0
Boxplots showing median per topology log-likelihoods. Top two plots show sloping distribution with all Platyhelminth-rooted topologies with the 15 top-scored topologies. Bottom two plots show all values near y = 0.

Boxplots showing median per topology log-likelihoods. Top two plots show sloping distribution with all Platyhelminth-rooted topologies with the 15 top-scored topologies. Bottom two plots show all values near y = 0.

This suggests an LBA involving Platyhelminthes that affects the position of the root. Simulation confirmed misspecified models favour a platyhelminth root.

(5/7)

2 months ago 2 1 1 0

Under a site homogeneous LG model, taxon jackknife analyses strongly preferred trees rooted on Platyhelminthes. This preference was absent under a complex site-heterogeneous model.

(4/7)

2 months ago 0 0 1 0
Scatterplots showing branch lengths of interest. Platyhelminthes branch always above y-axis break and interphylum branches are the cluster of points closest to y = 0.

Scatterplots showing branch lengths of interest. Platyhelminthes branch always above y-axis break and interphylum branches are the cluster of points closest to y = 0.

For all 15 possible trees, the internal branches (orange) were even shorter than the (maybe inexistent) Deuterostome branch.

The branch leading to Platyhelminthes was always considerably longer than branches leading to other phyla (blue).

(3/7)

2 months ago 0 0 1 0
15 possible 5-taxon spiralian phylogenetic trees with list of publications supporting each tree

15 possible 5-taxon spiralian phylogenetic trees with list of publications supporting each tree

We restricted our sample of spiralian taxa to its five largest phyla (Annelida, Brachiopoda, Mollusca, Nemertea and Platyhelminthes).

We found published studies supporting all 15 possible trees connecting these groups.

(2/7)

2 months ago 1 1 1 0
Are interphylum spiralian relationships resolvable? The phyla making up the major animal clade of Spiralia have been clear since the advent of molecular phylogenetics; the relationships between these spiralian phyla have not. The lack of consensus over the relationships between these important animal phyla might be a clue implying their emergence in an explosive radiation. Focusing on the five largest spiralian phyla (Annelida, Brachiopoda, Mollusca, Nemertea and Platyhelminthes) and using two phylogenomic datasets, we have applied site-bootstrapping and taxon-jackknifing to explore this example of taxonomic instability. Analyses on the 105 possible rooted trees relating them showed that interphylum branches are very short. Preference for rooting Spiralia on Platyhelminthes is a long-branch artefact. Most analyses on the 15 unrooted trees showed a preference for the same topology but the support over other solutions was non significant. We conclude that the spiralian phyla emerged in rapid succession resulting in a difficult to resolve radiation. The deep history we infer for Spiralia has wide ranging implications for our interpretation of Cambrian fossils and for the evolution of traits such as biomineralization, segmentation and larvae. Impact Statement Analyses of two independent phylogenomic datasets suggest an explosive radiation at the origin of Spiralia, with implications for understanding the group’s evolutionary history. ### Competing Interest Statement The authors have declared no competing interest.

New paper on @biorxiv-evobio.bsky.social: Are interphylum spiralian relationships resolvable? doi.org/10.64898/202...

@maxjtelford.bsky.social and I tried answering this question with two independent phylogenomic datasets.

(1/7) 🧪

2 months ago 11 9 2 0
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a dirt road going through a desert landscape with mountains in the background ALT: a dirt road going through a desert landscape with mountains in the background

If anyone spots a brain skittering about between Woburn Place and Gower St, please let me know.

I seem to have misplaced mine post lecture.

2 months ago 1 0 0 0

As someone who used to be in charge of the spinnaker, I confess to some unhealthy curiosity of how the all-spinnaker rig would behave (wind angle constraints aside).

Add to that, are they all symmetric, asymmetric, a combination? 🤔

I do doubt that a single bowman would suffice...

3 months ago 2 0 0 0