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Posts by Joris Bertrand

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PhD Position on mouse lemur population genomics W/M Employer description

We are currently recruiting a PhD student to conduct a doctoral thesis on mouse lemur population genomics.

Main supervisor: Helena Teixeira ( at ISEM @isemevol.bsky.social )

Application deadline: 19 April
2026

More info euraxess.ec.europa.eu/jobs/420224

1 month ago 8 11 0 1
Photo d'une plante à côté d'un tas de pierres. Elle a des feuilles vertes en lobes au ras du sol et porte trois inflorescences avec des fleurs roses.
Il s'agit d'Onobrychis pyrenaica, l'esparcette des Pyrénées.

Photo par Luis aratores, via Wikimedia Commons.

Photo d'une plante à côté d'un tas de pierres. Elle a des feuilles vertes en lobes au ras du sol et porte trois inflorescences avec des fleurs roses. Il s'agit d'Onobrychis pyrenaica, l'esparcette des Pyrénées. Photo par Luis aratores, via Wikimedia Commons.

Le saviez-vous ? Les Pyrénées abritent une flore exceptionnelle, dont plusieurs dizaines d’espèces qu’on ne trouve nulle part ailleurs. Ce sont ce qu’on appelle des espèces endémiques.

Certaines ne poussent même que sur quelques sommets ! Malheureusement, cela les rend très vulnérables.

1 month ago 37 15 2 0

Reminder: we are looking for an enthusiastic post-doc and are still welcoming applications until mid-March to work in our team at @upvd.bsky.social ! #speciationresearch #orchidresearch #populationgenomics #multiomics #3Dphenotyping #transcriptomics #metabolomics #naturalpopulations

2 months ago 0 2 0 0

In addition to the post-doc advertised by Joris, note the opening of the other post-doc position in population genomics, located in Montpellier (IRD).
yannbourgeois.github.io/blog/2026/po...

You can apply at this link:
emploi-recrutement.ird.fr/offre-de-emp...

bsky.app/profile/jori...

2 months ago 5 5 0 0

We couldn't do it without our authors, and we look forward to another year of ground breaking research published with us.

If you want to be part of our history, why not consider one of our journals as the home for your research this year?
academic.oup.com/biolinnean/p...

2 months ago 3 2 0 0

With @bourgeoisyann.bsky.social and @anaisgibert.bsky.social we are recruiting a post-doc to integrate multi-omic data to investigate the links between genotype, phenotype and fitness in Ophrys orchids evolutionary divergence. Feel free to contact us or share!

www.jorisbertrand.com/wp-content/u...

2 months ago 5 6 0 3

Thanks for sharing our work @tank-silvia.bsky.social. Hope you will enjoy reading the manuscript! ;-)

2 months ago 2 0 0 0
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A cryptic hybrid zone reveals the genomic basis of flower colour variation in a plant with a large and complex genome www.biorxiv.org/content/10.64898/2026.01...

2 months ago 4 1 0 1

A cryptic hybrid zone reveals the genomic basis of flower colour variation in a plant with a large and complex genome www.biorxiv.org/content/10.64898/2026.01...

2 months ago 1 1 0 0

The story of a partnership that started from a MSc project on taxonomy and conservation and ended up with a multi-omic evolutionary study: www.biorxiv.org/content/10.6...
A PhD chapter from @pascaline27.bsky.social at @upvd.bsky.social. Cc. @anaisgibert.bsky.social @cedbertrand.bsky.social & co.

2 months ago 0 1 0 0
Deux postes de MCU ouverts au concours 2026 - LEHNA - Laboratoire d'Ecologie des Hydrosystèmes Naturels et Anthropisés - UMR5023 Laboratoire d'Ecologie des Hydrosystèmes Naturels et Anthropisés

JOB ALERT:
Deux postes de Maitre.sse de Conférences / septembre 2026 /LEHNA / Lyon 1 :

- écologie avec un profil enseignement en Biologie végétale et écologie.
- écologie et évolution avec un profil en Biologie animale et écologie.
umr5023.univ-lyon1.fr/lehna/actual...

2 months ago 3 5 0 0
Junior research scientist in modelling for genomic prediction using complex data CR26-GA-1 - You will join the Genetics, Physiology and Livestock Systems (GenPhyse, about 150 permanent staff) joint research unit, where researchers aim to contribute to the agroecological transition of livestock systems through better understanding of livestock biology, genetic bases of traits, and selection schemes to achieve resilient populations. The unit brings together skills in biology, physiology, genomics, genetics, statistics, and bioinformatics. Within the unit, you will join the Chamade team (Characterization and management of genetic diversity) of the Diversity and Selection group comprising methodologists in quantitative genetics (genomic prediction, selection and evolution) and population genomics, as well as statisticians. Within your research team, you will be in charge of developing a new research programme in applied statistics to integrate high-throughput, heterogenous, and multiscale data into genetic and genomic evaluation methods. You will conduct your research to improve genomic prediction models by integrating new information relative to genome function (e.g. functional annotation), molecular phenotypes (e.g. transcriptomics, methylation), and high-throughput or intermediate phenotypes (e.g. longitudinal data, high throughput sensors).To integrate different types of data into current genomic prediction models, you will draw on a variety of statistical modelling, for example modelling SNP effects according to their functional annotation category, or including random effects capturing the inter-individual covariance for intermediate phenotypes. The modelling could draw, for example, on hierarchical models, meta-analysis methods, mediation analysis or machine learning, possibly simulation-based. In addition, as new high-throughput data may not necessarily be available on the same individuals as traditional data, their integration will require the implementation of suitable statistical techniques. The predictive performance of the developed models will be evaluated using numerical simulations, for instance based on real breeding programmes. The models will also be tested on real data from experimental and commercial programmes of livestock species. These data will be available through existing projects and partnerships within the unit and the division to initiate your research project. Computational efficiency must be taken into consideration in your developments to ultimately ensure their practical use in genetic and genomic evaluation. To develop your research, you will benefit from the proximity of experts in statistics, computer science, quantitative, molecular and population genetics within GenPhySE. In accordance with INRAE's policy for open science, in addition to scientific publications, you will promote your work by distributing free software implementing the new methods developed to ensure their wide dissemination to the international community.

A new permanent position is opened in our group at the Animal Genetics Division of @inrae-france.bsky.social to work on the development of new prediction models for genomic selection in livestock.

Job description is here : urls.fr/FZNWJQ

Don't hesitate to contact me for more information !

2 months ago 3 7 0 0
Lettre ouverte d'Anne Fraïsse Présidente de l'Université de Montpellier Paul-Valéry au Président de la république | UPVM Monsieur le Président,On meurt dans vos Universités. On meurt dans mon Université. D’excès de travail, de stress, d’usure, de désespoir, d’indifférence.

"Morituri te salutant" : les universitaires se battent encore pour une université qui se meurt...

La courageuse lettre ouverte de Mme Anne Fraïsse, présidente de l'U de Montpellier-Paul Valéry www.univ-montp3.fr/fr/communiqu...

2 months ago 2 3 0 0
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Time to publish responsibly: DAFNEE, a database of academia-friendly journals in ecology and evolutionary biology Abstract. The current economics of scientific publishing reveal a profound imbalance: academia pays prices far exceeding the actual costs of publication. R

Responsible publication of your research!

To help you do this @nicolasgaltier.bsky.social and coauthors have put together a handy database of academia-friendly journals, DAFNEE. You can read about it in their article recently published in @jevbio.bsky.social:

doi.org/10.1093/jeb/...

2 months ago 40 29 0 2
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TULIP Summer School 2026
Applications are OPEN ✅

“Biological interactions from genes to ecosystems”
will take place from June 27 to July 3, in France 🏔️

Open to PhD, Masters students & Postdoc researchers in ecology, evolution and functional biology

www.labex-tulip.fr/eng/news/tul...

3 months ago 9 11 0 0

🚨 New offer in our lab:
🐝🧬22-month postdoc or engineer position to estimate the effectiveness of the genetic queen fertilisation control in honey bees through large-scale sequencing and genomic analysis
Location: Toulouse, France 😍
More information: thibaultleroyfr.github.io/pdf/Annonce_...
Reposts🙏

3 months ago 4 8 0 1

Just a week left to apply for a position in our Editorial Board!

3 months ago 2 8 0 0
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Chat-GPT en live dans l’amphi (?) et communication au sein du groupe (?)

3 months ago 0 0 0 0

Cc. @anaisgibert.bsky.social and co-authors.

3 months ago 0 0 0 0
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Important milestone for the project and huge amount of work by @lvandenabeele.bsky.social to set up a pipeline for both investigating the systematics and characterising structuring reticulation events across the diversification of bee orchids (Ophrys): www.biorxiv.org/content/10.6...

3 months ago 3 2 1 0
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L’Agence nationale de la recherche (#ANR) est contrainte d’adapter temporairement ses activités dans le cadre des services votés. Le calendrier et la mise en œuvre des appels à projets, dans l’attente de l’adoption de la loi de finances pour 2026, sont précisés dans ce #communiqué ➡ bit.ly/3NyLwbI

3 months ago 11 18 0 3

Phylotranscriptomics Allows Distinguishing Major Gene Flow Events from Incomplete Lineage Sorting in Rapidly Diversifying Mimetic Orchids (Genus Ophrys) www.biorxiv.org/content/10.64898/2026.01...

3 months ago 2 1 0 0

Phylotranscriptomics Allows Distinguishing Major Gene Flow Events from Incomplete Lineage Sorting in Rapidly Diversifying Mimetic Orchids (Genus Ophrys) www.biorxiv.org/content/10.64898/2026.01...

3 months ago 4 1 0 0

Phylotranscriptomics Allows Distinguishing Major Gene Flow Events from Incomplete Lineage Sorting in Rapidly Diversifying Mimetic Orchids (Genus Ophrys) www.biorxiv.org/content/10.64898/2026.01...

3 months ago 1 1 0 0
LinkedIn This link will take you to a page that’s not on LinkedIn

📢 Recrutement – Ingénieur·e plateforme génomique
L’IRD recrute un·e ingénieur·e en génomique de la biodiversité pour la plateforme Guyomique, à Cayenne (Guyane)

📄 CDD 24 mois
👉 emploi-recrutement.ird.fr/offre-de-emp...

🙏 N’hésitez pas à partager !
@umramap.bsky.social @ird-fr.bsky.social

3 months ago 3 6 1 0

Climbing invasions or climatic refugees: how many and to which extent non-native plant species could reach the Pyrenees mountains under climate change? www.biorxiv.org/content/10.64898/2026.01...

3 months ago 1 1 0 1
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Climbing invasions or climatic refugees: how many and to which extent non-native plant species could reach the Pyrenees mountains under climate change? www.biorxiv.org/content/10.64898/2026.01...

3 months ago 3 1 0 0

We often do care about endemic and/or threatened species, but what about the ability of non-native (plant) species to successfully survive in a mountain biodiversity hotspot under climate change? Check out the last preprint of the team!

3 months ago 0 0 0 0
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Projecting spatiotemporal bioclimatic niche dynamics of endemic Pyrenean plant species under climate change: how much will we lose? Species distributions are shifting under global change, with mountain ecosystems among the most vulnerable. In such landscapes, the ability to track changing conditions is limited, threatening narrow....

Our study on the spatio-temporal evolution of suitable habitats for Pyrenean endemic plant species under climate change is online in @ecography.bsky.social:
nsojournals.onlinelibrary.wiley.com/doi/10.1002/...

4 months ago 1 0 0 0
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Introduction to population genomics 16-20 March 2026

🌍 Join our online course: Introduction to Population Genomics with @bourgeoisyann.bsky.social & @tiboleroyinen.bsky.social
📅 16–20 March 2026
Hands-on training in bioinformatics, population structure, demographic modeling & more!

www.physalia-courses.org/courses-work...

4 months ago 3 2 0 0