Scheme for using deep learning for geographic association studies in genome-environment association studies.

New preprint led by PhD student Che-Wei Chang on using deep learning to predict the geographic origin of #barley genebank accessions and how it can be used in genome-environment association (GEA).

Take home: Prediction works well, but improvement of GEA is limited.

www.biorxiv.org/content/10.1...

a black and white photo of a woman holding her head and screaming . ALT: a black and white photo of a woman holding her head and screaming .

Reading my barley scripts from 2013...

Wonder how fast and stable these changes in protein would be, if it would be as fast as reported in Brassicaceae

bsky.app/profile/spic...

Sorry, read your answer in the wrong order.

Thanks! Do you know if this is also true for the protein content? Since when did barley become animal fee rather than human food?

Based on the #BreedingValue project, we've added new trait data visualizations in the form of radar, bubble and heatmap charts for scale-type traits to highlight the differences or performance of individual germplasm.

3/5

Why Pangenomes? @mirischreiber.bsky.social
explains all using the #barley #pangenome as an example the of structural variation present between diverse lines and what this reveals #cms #seminar

Do we know about the protein content changes in barley grains during the domestication?

PhD student opening: understanding of the relationships between assimilate supply, metabolism and seed architecture at the Leibniz Institute of Plant Genetics and Crop Plant Research

www.ipk-gatersleben.de/en/career/jo...

#PlantSciJobs #genetics #metabolomics #crops