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Posts by Matthew Silk

Less than a month left to apply for our summer course!

You are welcome to contact us if you are unsure if the course is for you or have any other questions.

1 week ago 3 3 0 0
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New research from #BiologyLetters: How do infections impact social relationships? royalsocietypublishing.org/rsbl/article... | #Behaviour #Ecology #Evolution #Epidemiology

3 weeks ago 14 5 1 0
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PLEASE SHARE. PhD Opportunity with me, Ben Raymond and Jan Engelstaedter and Andrew Letten at University of Queensland.

Experimentally testing mechanisms of how temperature may change selection and spread of AMR in E. coli. Coupled with some advanced modelling and sequencing.

๐Ÿงช๐Ÿฆ  #microsky

3 weeks ago 18 28 1 1
Book cover for https://oliviergimenez.github.io/banana-book/

Book cover for https://oliviergimenez.github.io/banana-book/

๐Ÿ“˜ New book out soon !

Iโ€™m excited to share that ๐๐š๐ฒ๐ž๐ฌ๐ข๐š๐ง ๐€๐ง๐š๐ฅ๐ฒ๐ฌ๐ข๐ฌ ๐จ๐Ÿ ๐‚๐š๐ฉ๐ญ๐ฎ๐ซ๐ž-๐‘๐ž๐œ๐š๐ฉ๐ญ๐ฎ๐ซ๐ž ๐ƒ๐š๐ญ๐š ๐ฐ๐ข๐ญ๐ก ๐‡๐ข๐๐๐ž๐ง ๐Œ๐š๐ซ๐ค๐จ๐ฏ ๐Œ๐จ๐๐ž๐ฅ๐ฌ: ๐“๐ก๐ž๐จ๐ซ๐ฒ ๐š๐ง๐ ๐‚๐š๐ฌ๐ž ๐’๐ญ๐ฎ๐๐ข๐ž๐ฌ ๐ข๐ง ๐‘ ๐š๐ง๐ ๐๐ˆ๐Œ๐๐‹๐„ is being published by Chapman & Hall / CRC Press

Hope itโ€™s useful to students, researchers, and practitioners

#StatisticalEcology #NIMBLE

2 months ago 85 26 2 1

Just over a week left to apply for this PhD project (unfortunately UK students only). If you're interested then please get in touch!

2 months ago 10 9 0 0
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Not your private tรชte-ร -tรชte: leveraging the power of higher-order networks to study animal communication Abstract. Animal communication is frequently studied with conventional network representations that link pairs of individuals who interact, for example, th

Very happy to chat with anyone who might be interested. The broader ideas we'd like to explore are introduced here:
doi.org/10.1098/rstb...

2 months ago 4 0 0 0
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New (competition funded) PhD opportunity with me,
@iaciac.bsky.social and @dralgernon.bsky.social
www.findaphd.com/phds/project...
Higher-order networks and animal communication. Suited to someone keen on network science theory/computational modeling and keen to adapt this to ecology & evolution.

2 months ago 35 41 1 2

Huge thanks to Anna, Nina and Nakeya for a truly interdisciplinary team effort. And to the editors and reviewers for helping to make a tricky paper better (a very reassuring #PeerReview experience)!

2 months ago 0 0 0 0
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There are lots of aspects of this paper that I think are very cool (of course!) but a sneaky contribution to the age old debate on how to eat a #CreamTea has to be my favourite! A nod to my time in Cornwall @uniexecec.bsky.social. [photo borrowed from Rodda's dairy who I'm hoping won't mind!]

2 months ago 3 0 1 0
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A typology of rules for knowledge exchange in higher-order interactions Author summary Learning from each other is important to humans and other animals as it provides safe or quick ways to gather information about the world around you. Because of this โ€˜social learningโ€™, ...

A new paper in @plos.org Complex Systems from my time at @nimbios.bsky.social with Nina Fefferman.
We set out some ways of classifying rules for social learning and knowledge exchange in higher-order networks.
doi.org/10.1371/jour...

2 months ago 12 3 1 0
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Really great to see this paper out. A fun chance to play with some higher-order network approaches for animal spatial data! Great to make the most of @grf.bsky.social dropping by @edinburgh-uni.bsky.social on sabbatical, and very proud of Ross on his first published paper!!

2 months ago 2 0 0 0
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Male Ring Ouzel near Porlock Weir/Marsh early this afternoon was a fun surprise! Showed super well feeding out in the open from the coast path - much better than this terrible photo suggests! @somersetbirds.bsky.social #UKbirding

3 months ago 19 2 0 0
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โญNew paper!โญ

About generative network modelling - a key approach for understanding network structures.

First half:
We give a general introduction to generative network models

Second half:
We consider their use in animal behaviour research

www.sciencedirect.com/science/arti...

4 months ago 13 4 1 0
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A Farewell to Arms: The Trade-off Between Growth and Defence in Bacteria (York YBDTP Project) at University of York on FindAPhD.com PhD Project - A Farewell to Arms: The Trade-off Between Growth and Defence in Bacteria (York YBDTP Project) at University of York, listed on FindAPhD.com

Two fully-funded PhD openings in my research group at the University of York.
If youโ€™re excited about viromes, phage biology, Nanopore sequencing, soils and the odd bit of alpine or agricultural field sampling, weโ€™d love to hear from you!
๐ŸŒฑ๐Ÿฆ ๐Ÿ”๏ธ

tiny.cc/c4pv001
tiny.cc/e4pv001

4 months ago 17 27 0 1
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๐ŸŒ๐Ÿ“ข Postdoc alert | 3-yr starting early 2026

Please ๐Ÿ”!

Understand how ecosystem stability is changing across space and through time using niche modelling, pinpoint at-risk species/regions, and build tools that drive conservation action๐ŸŒฟ๐Ÿงญ๐Ÿ“ˆ

๐Ÿ‘‰ tinyurl.com/2mafwru3

#Ecology #Jobs #Biodiversity

4 months ago 19 28 0 2

Another new animal social network paper just out in @asab.org Animal Behaviour: How can we make the most of generative network models in behavioural ecology research?
doi.org/10.1016/j.an...
A lot of fun to help @jbbrask.bsky.social and @drwhale.bsky.social put this together!
doi.org/10.1016/j.an...

4 months ago 9 2 0 0

And these considerations really do that lie at the heart of making the most huge amount of diverse social network data we now have in wild populations.

4 months ago 2 0 0 0

Its very exciting to see this paper out in @behavecol.bsky.social. These conversations, expertly led by @delphinedemoor.bsky.social, have really shaped how I now think about working with social network data. Check out Delphine's thread to learn more!

4 months ago 8 4 1 0
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Interested in how life history may shape the gut microbiome of a wild mammal? Keen on getting to work with an iconic long-term study system in Scotland?

Check out this PhD opportunity with me, Josephine Pemberton and @gfalbery.bsky.social

Reach out to chat more!

www.findaphd.com/phds/project...

4 months ago 31 32 1 0
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Fully funded NERC GW4+ PhD Opportunity - *Understanding The Spread of Antimicrobial Resistance by Migratory Birds*

Supervised by me, @stubearhop.bsky.social (Exeter) & Patricia Brekke (ZSL). Application deadline 8th January. Please get in touch for more info

www.findaphd.com/phds/project...

5 months ago 12 20 0 1

My lab at Indiana University is searching for a *postdoc* and *technician* to contribute to our work studying the evolution of social behavior using fruit flies as a model system. Details below, feel free to email me with any questions! More info on our research: saltzlab.com

5 months ago 50 79 3 2
alt="Schematic of a graph of a population trajectory for blue tits that is known for half of the x-axis (time) and then forecasted with uncertainty. Above the population trajectory are some weather images (a sun and some rain) they have connections to the population size but the path is unknown. "

alt="Schematic of a graph of a population trajectory for blue tits that is known for half of the x-axis (time) and then forecasted with uncertainty. Above the population trajectory are some weather images (a sun and some rain) they have connections to the population size but the path is unknown. "

PhD advert alert!

Come work with me at Edinburgh.

I'm advertising a PhD on: "Predicting responses of birds to climate change", competition funded through the E5 DTP. Would suit those with an interest in predicting responses to climate change, birds, or both.

e5-dtp.ed.ac.uk/project?item...

5 months ago 3 8 0 0
The Adaptive Relationships Framework illustrating how broad socioecological pressures shape the social solutions animals use to meet these challenges, and how these lead to social strategies and emergent structures that help them gain access to those solutions.

The Adaptive Relationships Framework illustrating how broad socioecological pressures shape the social solutions animals use to meet these challenges, and how these lead to social strategies and emergent structures that help them gain access to those solutions.

Social relationships are powerful predictors of fitness across social animals. But *why*?

In our new @cp-trendsecolevo.bsky.social paper, we outline testable predictions for why relationship quality and quantity adaptively vary across socio-ecological contexts.

tinyurl.com/55dnkeh7

6 months ago 100 53 1 3
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I'm v excited to be recruiting a PhD student to work on badger behaviour and ecology! Starting date is March 2026; see the ad here, or message me for more details: www.gregalbery.me/s/March-2026...

6 months ago 57 63 0 1
squidSim: a flexible R package for structured and reproducible simulations in Ecology and Evolutionary Biology

Interested in simulating the kind of data that you might commonly find in evolutionary and ecological studies?

Then we have the R package for you - squidSim!!

Check our new preprint:
ecoevorxiv.org/repository/v...

7 months ago 67 34 2 6

Torness this morning 06:07-09:21:
1 arctic skua, 29 manxies, 82 sandwich, 8 arctic, 6 common and 7 commic terns, 59 fulmar, 27 common scoter, 1 velvet scoter, barwit and 3 whimbrel.
Then found this beaut of a house martin expertly photographed by @jarrodhadfield.bsky.social later on.
#BirdingLothian

8 months ago 13 0 0 0

Looks same as bird in Firth of Forth a few days ago
bsky.app/profile/norm...

8 months ago 1 0 0 0
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Opportunities โ€” ASAB

๐ŸšจJOB alert๐Ÿšจ Full-time Managing Editor role for @asab.org journal Animal Behaviour. Applicants must have animal #behaviour background; previous editorial experience would be ideal.
Apply by 31st July 2025.
#publishing #editor #job

More details: www.asab.org/opportunities

PLEASE share widely.

9 months ago 33 52 0 2
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been a long time coming, there's now a preprint along with Will Hoppitt describing our new R package for creating, fitting and interpreting bayesian NBDA models (STBayes). www.biorxiv.org/content/10.1.... Documentation is here michaelchimento.github.io/STbayes/inde...

10 months ago 58 30 2 3
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Disentangling non-random assortment, indirect effects, and joint plasticity as causes of phenotypic (dis)similarity between social partners Abstract. Social partners frequently resemble each other. These correlations between the phenotypes of interacting individuals (e.g. social partners, group

Our paper on disentangling assortative mating and indirect genetic effects in empirical datasets has just been accepted in @jevbio.bsky.social ! It has been a long process (5 years in the making!) and I am very proud of the result ๐Ÿฅณ
academic.oup.com/jeb/advance-...

10 months ago 47 22 4 1