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Posts by SeqCode

SeqCode Prize | SeqCode Registry

Please share as widely as possible. Early career scientists and graduate students are particularly encouraged to participate. Additional information can be found at seqco.de/prize, application deadline: April/30/2026.

5 days ago 0 0 0 0

This prize recognizes significant achievements in prokaryotic systematics advancing the aims and reach of the #SeqCode. The recipient will receive travel support to attend the #ISME20 Symposium in Auckland, New Zealand.

5 days ago 0 0 1 0
SeqCode Prize | SeqCode Registry

The SeqCode Committee has opened the call for applications to the SeqCode Prize 2026, sponsored by ISME.

@isme-microbes.bsky.social

5 days ago 1 4 1 0

@isme-microbes.bsky.social offers a great opportunity to publish uncultured microbes via #SeqCode using #genomes as type material. A fantastic step toward embracing the true diversity of microbes! But isolates are also welcome πŸ§«πŸ”¬πŸ¦ πŸ˜
@seqcode.bsky.social

3 months ago 6 7 0 0

πŸŽ‰ The #SeqCode has reached a significant milestone: with the validation of the genus Skiveiella, a total of 1,000 #names have now been validly published under the SeqCode.

This achievement marks a major step forward in the adoption and impact of the SeqCode within the scientific community.

3 months ago 11 4 0 0
A Primer in Latin for Prokaryotic Nomenclature
A Primer in Latin for Prokaryotic Nomenclature YouTube video by SeqCode

Part 2 of our #SeqCode video series is here!
This time, we dive into #Latin and #name formation, presented by Dr. Dominik Berrens from Johannes Gutenberg-UniversitΓ€t in Mainz.

🍿 Enjoy share, and don't be shy - ask questions in the comments!

#Nomenclature #Taxonomy

www.youtube.com/watch?v=eldx...

10 months ago 7 6 0 0
A Brief Introduction to the SeqCode
A Brief Introduction to the SeqCode YouTube video by SeqCode

A brief introduction to the #SeqCode is now online!
Check it out, share it with your colleagues, and let us know what you think!

Bravo to @rodriguez-r.bsky.social for preparing and recording this!

Part# 1

www.youtube.com/watch?v=3-wk...

10 months ago 5 5 0 0

Happy classifying and naming!

10 months ago 0 0 0 0
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microbe! πŸ₯°

10 months ago 0 0 0 0

Zombie names are creating worries among botanists (and not only)...

10 months ago 1 0 0 0

😱😱😱

10 months ago 0 0 0 0

Saving microbes might sound like a crazy idea to some, but naming them could actually help protect them too. Imagine if all Lactobacillus spp. suddenly disappeared from your gut… you'd better name them!

#Taxonomy #Nomenclature #Microbes

10 months ago 2 0 0 0

πŸ‘

1 year ago 0 0 0 0

Great initiative πŸ‘

1 year ago 1 0 0 0
Video

Quentin Groom, Stream Leader at #TETTRIsEU, explains why we released a #PolicyBrief on Biological #Nomenclature.

"There is a gap we shall fill in how we work together with #scientists from all over the world..."

You can read and download the PB here tettris.eu/publications/

#Taxonomy4Science

1 year ago 7 3 1 0
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This paper is part of a special issue of SAM partnered with
#seqcode, as we also propose names for two novel genera within the MB11C04 family, as well as suggest a non-alphanumeric name, Seribacteraceae. Check it out!

1 year ago 4 2 1 0
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Very happy to share that the first manuscript of my PhD with
@cotoorellana.bsky.social
in #MolEcol @mpimarinemicrobio.bsky.social
is published! We characterise a family of Verrucomicrobiota in the context of spring blooms, revealing their specialisation in potential complex glycan degradation

1 year ago 11 3 1 1

πŸ‘

1 year ago 0 0 0 0
Slack

A 6-month discussion on the revision of the #ICNP is underway, including #Section_10 to regulate the #Candidatus names. Pro-statuses will be added to the names with various nomenclature types πŸ€”.

Please share your thoughts:
icnp-revision.slack.com

How to join: doi.org/10.1099/ijse...

#SeqCode

1 year ago 1 0 0 0

"MIRRI-ERIC fully supports the importance of maintaining physical type strains as NTs, while also recommending genome sequence data that meet SeqCode's quality standards as additional NTs." πŸ‘

#Nomenclature #SeqCode #Taxonomy #genomes

1 year ago 1 0 0 1

This is a great study, and both codes are doing their best to serve our scientific community. The SeqCode recognizes names validly published under the ICNP and their priorities; thus, Patescibacteriota it is. We hope this promotes the reuse of existing names where possible.

1 year ago 4 0 0 0

Later synonym (phylum name) under the SeqCode:
Patescibacteriota (ex Rinke et al., 2013) Dutkiewicz et al., 2024

1 year ago 1 0 0 0

Thus, it is considered a later synonym...

1 year ago 0 0 0 0

It is important to note that, based on the validation date, the phylum name Patescibacteriota has priority over Minisyncoccota under the SeqCode.

1 year ago 0 0 1 0
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A typical nature of taxonomy and nomenclature, with ongoing discoveries and new proposals...

1 year ago 0 0 1 0
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Proposal of Patescibacterium danicum gen. nov., sp. nov. in the ubiquitous bacterial phylum Patescibacteriota phyl. nov. Abstract. Candidatus Patescibacteria is a diverse bacterial phylum that is notable for members with ultrasmall cell size, reduced genomes, limited metaboli

Originally defined by Rinke et al. (2013) as Candidatus Patescibacteria, the phylum #Patescibacteriota now has a validly published name and an official type!

Explore the lifestyle, biogeography, and metabolic capabilities of its type genus, #Patescibacterium, here: doi.org/10.1093/isme...

#SeqCode

1 year ago 10 4 1 0

"...nature needs to be understood and named in a stable, universal, operationally neutral, and transcultural manner."

From a collective international appeal on the stability of biological nomenclature.

Read more: doi.org/10.1093/bios...

#Nomenclature #names #Biodiversity

1 year ago 1 0 0 0
Register list for 44 new names including Fervidifonticultor octavus sp. nov. | SeqCode Registry

Did you know that the #GTDB phylum #CSP1-3 is now called #Sysuimicrobiota?

This new name originates from its type genus, which is named after Sun Yat-Sen University (SYSU) in China.

Explore all newly named members here: registry.seqco.de/registers/r:...

Read: doi.org/10.1093/nsr/...

#SeqCode

1 year ago 3 0 0 0
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SeqCode: a nomenclatural code for prokaryotes described from sequence data - Nature Microbiology SeqCode is the result of a community effort to unify nomenclature for uncultured and cultured prokaryotes using genome sequences.

Read more about the code: doi.org/10.1038/s415...

Explore the SeqCode Registry: registry.seqco.de

#SeqCode #Nomenclature #Genomes #Bacteria #Archaea

1 year ago 4 4 0 0

Since 2022, the SeqCode Registry has enabled the valid publication of 700+ names, providing nomenclatural stability and recognition for prokaryotes described without pure cultures. We’re a small but growing community advancing the use of genomic data in naming microorganisms.

#SeqCode #Nomenclature

1 year ago 5 2 0 0