Fun to be back at QI for another year!

So sorry. Going through the same thing with our senior girl, it's heartbreaking.

Not to be confused with what I just posted, but there is *also* a software engineer position open in the Funke lab! Check it out as well. Spoiler: we will all work closely together to do awesome things!

👇🏻👇🏻👇🏻

Apply here:
Bioimage Analyst: careers.humantechnopole.it/job/Bioimage...
Rsearch Software Engineer:
careers.humantechnopole.it/job/Research...

Lake Como, by Julia Solonina on unsplash

portofino, by Kristīne Zāle on unsplash

And lastly, you'll get to live in one of the most beautiful countries on earth. We're based in Milan, in northern Italy, a short train ride away from some of the most stunning scenery on the planet.

You'll work closely with the incredible research talent at Human Technopole, most closely with the labs for Florian Jug and Jan Funke, who are developing novel AI-based image analysis methods, but we also collaborate broadly across the institute and across Italy, Europe and the world.

GitHub - CAREamics/careamics: A deep-learning library for denoising images using Noise2Void and friends (CARE, PN2V, HDN etc.), with a focus on user-experience and documentation.) A deep-learning library for denoising images using Noise2Void and friends (CARE, PN2V, HDN etc.), with a focus on user-experience and documentation.) - CAREamics/careamics

We also have a strong technology development mandate. Our RSE team takes new methods and casts them into usable tools both our facility and the community. They're currently working hard on careamics, a modern deep learning library for image restoration, but have exciting plans for the future.

Our facility is based around the idea of tight integration between research, software engineering, and bioimage analysis. Our bioimage analysts and RSEs work closely together to achieve our goal of proving cutting edge bioimage analysis to our users.

Our team is embedded within the Human Technopole National Facilities, a national-scale infrastructure serving the entire Italian research community with advanced equipment and methods.

A group of 5 people, two women and three men, standing in front of a part of top of Mt Blanc in Chamonix, France.

First, you'll join an awesome international team -- Our two amazing RSEs, Joran 🇫🇷 (who leads the RSE team) and Milly 🇬🇧, and two brilliant Bioimage analysts, Juan 🇦🇷 and Eugenia 🇮🇹, as well as myself 🇦🇺🇺🇸.

🚨🚨🚨JOB ALERT🚨🚨🚨

The Image Analysis Unit at Human Technopole in Milan is recruiting for two positions to join our growing team:

1) Bioimage Analyst
2) Research Software Engineer (RSE)

Read on to learn why one of these two people should be you!

Completely anecdotal, but last week I went to three gas stations here and two of them were completely out of petrol. Never happened before in the 4 years I've lived in Italy.

Honestly for me it's one of these two

Check this thread for a really unique opportunity to apply AI to some of the most challenging questions in biology... and maybe even have some fun while doing it with us at human technopole in Milan.

Cover for The People United: A Memoir of Hope and Resistance During Trump's First Term by Chris Pickett showing a group of people marching, carrying signs, and protesting.

Well I'm incredibly nervous.

My memoir, The People United, is now available for preorder!

Bookshop: tinyurl.com/ThePeopleUni...

B&N: www.barnesandnoble.com/w/the-people...

Amazon (ebook only): www.amazon.com/dp/B0GHPFWR99/

Other ebook vendors: books2read.com/u/bx2vo6

🚨Job Alert -- again!🚨
You are into disease risk prediction based on images or other data modalities? This is for you! 🫵
careers.humantechnopole.it/job/Postdoc-...
Part of our Scientific AI Flagship @humantechnopole.bsky.social and part of our mission to benefit society via biomedical #AI solutions.

Volume Rendering - Chameleon

Volume Rendering - Chameleon

Volume Rendering - Chameleon

Volume Rendering - Chameleon

Meet Kilian.

A 2 GB CT scan of a chameleon — rendering in the browser in a few hundred milliseconds.

Built with Kiln: a WebGPU-native out-of-core volume renderer.
Bricked volume storage, GPU memory virtualization, LRU streaming, compute shader ray marching.

Open source:
github.com/MPanknin/kil...

#nokings Milano singing Bella Ciao together ✊🏻

Come and work with us at @humantechnopole.bsky.social on cutting edge AI methods to advance human health!

👇🏻👇🏻👇🏻

I've seen this floating around a lot, but it really is a fantastic video essay

And that's all folks! Hope some of these are useful to you. Another batch coming soon(ish)

A Self-Supervised Foundation Model for Robust and Generalizable Representation Learning in STED Microscopy
www.biorxiv.org/content/10.1...

Enabling Real-Time Fluctuation-Based Super Resolution Imaging
www.biorxiv.org/content/10.1...

High-Throughput, Multiplex Immunofluorescence for the Computer-automated Immunophenotyping of Mycosis Fungoides
www.biorxiv.org/content/10.6...

SpatialDINO: A Self-Supervised 3D Vision Transformer that enables Segmentation and Tracking in Crowded Cellular Environments
www.biorxiv.org/content/10.6...

Seems cool, but listen to these dorks:

"All datasets and codebase are available upon request. "

Github or GTFO.

Synthetic data enables human-grade microtubule analysis with foundation models for segmentation
www.biorxiv.org/content/10.6...

A neural network model delivers a highly prognostic protein signature in cancer stem cells that identifies relapse in stage III colorectal cancer patients
www.biorxiv.org/content/10.6...

Self-Supervised Missing Wedge Correction in Soft X-Ray Tomography: Towards Accurate Cellular Morphology and Volume Quantification
www.biorxiv.org/content/10.6...

Scalable data harmonization for single-cell image-based profiling with CytoTable
www.biorxiv.org/content/10.1...

TransiScope: An Interactive Open-Source Platform for Automated Detection and Analysis of Transient Events in Time-Lapse Microscopy
www.biorxiv.org/content/10.1...