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Posts by phy_papers

Evolutionary Dynamics of Endogenous Feline Leukemia Virus in the Felis Genus Through the Lens of Genomics https://pubmed.ncbi.nlm.nih.gov/42013235/

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Prosthetic Joint Infection Caused by Staphylococcus argenteus: mNGS-Guided Diagnosis and Whole-Genome Characterization of an ST2250 Strain https://pubmed.ncbi.nlm.nih.gov/42011181/

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Emergence of outbreak-driving high-risk Pseudomonas aeruginosa lineages in Taiwan: phylogenomic insights into ST292 and the ST235* sublineage https://pubmed.ncbi.nlm.nih.gov/42012470/

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Taxonomic rearrangements in the genera Planomonospora and Planobispora and proposal of Thiemannella venezuelensis gen. nov., comb. nov https://pubmed.ncbi.nlm.nih.gov/42012872/

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Phenotypic crypticity despite strong phylogenetic divergence: diversification dynamics in a species complex of Arabian Pristurus geckos https://pubmed.ncbi.nlm.nih.gov/42012459/

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Genomic and functional adaptations in the guanylate-binding protein 5 highlight specificities of bat antiviral innate immunity https://pubmed.ncbi.nlm.nih.gov/42013170/

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Detection of JC virus DNA in CSF of pediatric patients with non-PML neurological disorders https://pubmed.ncbi.nlm.nih.gov/42010693/

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Phenotypic crypticity despite strong phylogenetic divergence: diversification dynamics in a species complex of Arabian Pristurus geckos https://pubmed.ncbi.nlm.nih.gov/42012459/

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Emergence of outbreak-driving high-risk Pseudomonas aeruginosa lineages in Taiwan: phylogenomic insights into ST292 and the ST235* sublineage https://pubmed.ncbi.nlm.nih.gov/42012470/

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Canalized gene regulatory networks stabilize floral polymorphism and enable modular transgressive expression www.biorxiv.org/content/10.64898/2026.04...

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Kingdom-wide comparative transcriptomics reveals deeply conserved and predictable stress response programs across Viridiplantae www.biorxiv.org/content/10.64898/2026.04...

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Retracing and rewriting the evolutionary trajectories of mammalian developmental enhancers www.biorxiv.org/content/10.64898/2026.04...

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A Seychelles warbler genomic toolkit www.biorxiv.org/content/10.64898/2026.04...

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Comparative analysis of transposable elements in jellyfish and hydroid species (Cnidaria: Medusozoa) www.biorxiv.org/content/10.64898/2026.04...

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Statistical Model Comparison Supports a Pitcher Origin of Utricularia Suction Traps www.biorxiv.org/content/10.64898/2026.04...

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Unlocking a flexible set of phylogenetic models for discrete and continuous trait evolution using discretized stochastic diffusion www.biorxiv.org/content/10.64898/2026.04...

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MutaPhy: A clade-based framework to detect genotype-phenotype associations on phylogenetic trees www.biorxiv.org/content/10.64898/2026.04...

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Metagenomic Analyses Reveal a Constrained Network of Nutritional Symbionts in Kissing Bugs www.biorxiv.org/content/10.64898/2026.04...

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Tissue-Specific Prevalence and Clonal Architecture of BRCA1/2 LOH-Inducing Chromosomal Aneuploidy www.biorxiv.org/content/10.64898/2026.04...

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A phylogenetic approach reveals evolutionary aspects and novel genes of bradyzoite conversion in Toxoplasma gondii www.biorxiv.org/content/10.64898/2026.04...

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Bi-level diversity optimisation for representative protein panel selection www.biorxiv.org/content/10.64898/2026.04...

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When Shape, Size, and Time Meet: Phylogenetic Analysis of the Evolution of Embryonic Shape Ontogeny in Physalaemus (Anura: Leptodactylidae) https://pubmed.ncbi.nlm.nih.gov/42003037/

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Necrotizing fasciitis associated with Acinetobacter lactucae and Bacillus paramobilis infections in 2 dogs https://pubmed.ncbi.nlm.nih.gov/42003239/

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CCAP receptor 2, rather than CCAPR1, functions in pupal ecdysis in the 28-spotted larger potato ladybird https://pubmed.ncbi.nlm.nih.gov/42003568/

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Genome sequence of the dimorphic Dothioraceae fungal isolate EMM_F3 https://pubmed.ncbi.nlm.nih.gov/42003646/

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The Epidemiology and Infection Control of Candida Auris in Shanghai https://pubmed.ncbi.nlm.nih.gov/42003753/

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Genomic Characterization of Antibiotic-Resistant Enterococcus Spp. Strains in Clinical Settings of Yichang, China https://pubmed.ncbi.nlm.nih.gov/42003960/

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Complete chloroplast genome of Euphorbia resinifera: overcoming biogeographical bias in phylogenetic inference and establishing a conservation genomics framework for threatened North-West African cactiform species https://pubmed.ncbi.nlm.nih.gov/42004013/

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A Cross-Sectional Study Shows Emergence of the Delta, 19B, 20A, 20B, 19A, and Omicron Variants of SARS-CoV-2 in Burkina Faso: A Conundrum Within a Conundrum https://pubmed.ncbi.nlm.nih.gov/42005677/

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Detection and genetic characterization of atypical porcine pestivirus in wild boars in European Russia https://pubmed.ncbi.nlm.nih.gov/42005842/

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