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Posts by Zhen-Qi Liu

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Convergent transcriptomic and connectomic controllers of information integration and its anaesthetic breakdown across mammalian brains - Nature Human Behaviour Luppi et al. identify transcriptomic and connectomic controllers of information integration and its breakdown induced by anaesthesia in humans, macaques, marmosets and mice.

The Mammalian Architecture of Information Integration🧠🧬

For #BrainAwarenessWeek, excited to share our latest work about #Neuroscience of #Consciousness in @nathumbehav.nature.com

www.nature.com/articles/s41... 🧵👇

1 month ago 18 6 1 1
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Organization of neuropeptide systems in the human brain | doi.org/10.1038/s415...

Neuropeptides are functionally diverse signaling molecules in the brain and body.

@cebric.bsky.social curates an atlas of neuropeptide receptors and relates it to brain function @natneuro.nature.com 🧩 🧠 ⤵️

1 month ago 39 19 1 1
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Competitive interactions shape mammalian brain network dynamics and computation - Nature Neuroscience Brain network architecture may balance cooperation and competition across circuits. Here the authors use computational whole-brain modeling across three species to show that models with competition ar...

Just out in @natneuro.nature.com! 🧠

“Competitive interactions shape mammalian brain network dynamics and computation”
www.nature.com/articles/s41...

Is large-scale brain communication purely cooperative — or is competition a core organizing principle?

We built 🧠 models to find out: read on🧵👇

1 month ago 17 7 1 0
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Join us on March 25th as we officially relaunch the Cambridge Networks Network! It’s an opportunity to meet researchers across disciplines working on complexity and networks at the University of Cambridge.

The event is open to all, so register on our website to secure your place.

See you there!

1 month ago 0 1 0 1
Nine subcortical/cerebellar atlases included in the subcortex_visualization Python package (and subcortexVisualizationR package in R). The atlases are depicted in two-dimensional vector graphic format.

Nine subcortical/cerebellar atlases included in the subcortex_visualization Python package (and subcortexVisualizationR package in R). The atlases are depicted in two-dimensional vector graphic format.

The extended version of my thesis procrastination project/subcortex visualization package is out now in both Python and R, now that I’ve graduated 🤠 This figure shows the 9 atlases included (and counting)!

Preprint: www.biorxiv.org/content/10.6...
Website: anniegbryant.github.io/subcortex_vi...

2 months ago 115 46 3 6
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netneurotools: a trainee-oriented approach to network neuroscience | doi.org/10.1101/2025...

Our lab’s internal toolkit for accomplishing everyday tasks in brain imaging ⤵️

4 months ago 76 36 1 3

Human cortical networks trade communication efficiency for computational reliability. www.biorxiv.org/content/10.64898/2025.12...

4 months ago 17 8 0 1
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Cognitive cartography of mammalian brains using meta-analysis of AI experts The complexity of the brain is increasingly mirrored by the complexity of the neuroscientific literature, yet no individual mind can fully grasp the diversity of scales, methodologies and model organi...

🧠 Excited to share our latest preprint: Automated Brain Mapping with AI Experts!🤖

www.biorxiv.org/content/10.6...

Ever wanted to summarise the cognitive/systems neuroscience literature beyond MRI and PET? Ever wished we could do the same for macaque 🐒 and mouse 🐭 ? Read on! 🧵👇

4 months ago 11 8 1 1
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Multivariate Resting-State Functional Connectivity Features Linked to Transdiagnostic Psychopathology in Early Psychosis Early psychosis (EP) is characterized by neurobiological changes, including alterations in resting-state functional connectivity (RSFC). We now understand that symptoms and neural changes may overlap ...

New from @haleyrwang.bsky.social: Multivariate Resting-State Functional Connectivity Features Linked to Transdiagnostic Psychopathology in Early Psychosis - Biological Psychiatry www.biologicalpsychiatryjournal.com/article/S000...

5 months ago 25 9 0 1
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Toward a unified taxonomy of information dynamics via Integrated Information Decomposition | PNAS Our ability to understand and control complex systems of many interacting parts remains limited. A key challenge is that we still do not know how b...

Finally published:
“Toward a unified taxonomy of information dynamics via Integrated Information Decomposition”
www.pnas.org/doi/10.1073/...

An information-theoretic framework to analyse complex multivariate dynamical processes ✨

6 months ago 29 6 2 0
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Excited to share that our work introducing the Reproducible Brain Charts (RBC) data resource is now published in Neuron!! 🎉

📚 Read the paper: authors.elsevier.com/c/1lpaF3BtfH...
🧠 Explore the RBC dataset: reprobrainchart.github.io

7 months ago 71 39 3 2
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Neuromorphic hierarchical modular reservoirs | doi.org/10.1101/2025...

How does hierarchical modularity shape computational function? ⤵️

7 months ago 22 9 1 0
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Network spreading and local biological vulnerability in amyotrophic lateral sclerosis |
doi.org/10.1038/s420...

How do brain network structure and local biological features shape the spatial patterning of atrophy in ALS? @asafarahani.bsky.social investigates ⤵️

7 months ago 22 16 1 0

netneurotools: a trainee-oriented approach to network neuroscience www.biorxiv.org/content/10.1101/2025.09....

7 months ago 3 1 0 0
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The effect of spherical projections on spin tests for brain maps | doi.org/10.1162/IMAG...

Spin tests are the de facto null model for map-to-map comparisons in brain imaging. Why don't they perfectly control false positives? @vincebaz.bsky.social explores ⤵️

7 months ago 25 14 1 1
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Integrating and interpreting brain maps | doi.org/10.1016/j.ti...

Imaging and recording technologies make it possible to map multiple biological features of the brain. How can these features be conceptually integrated into a coherent understanding of brain structure and function? ⤵️

8 months ago 74 42 1 0
Normative blood perfusion map on lateral and medial views of the inflated and 2D flat cortical surfaces (fsLR). Borders and areal names of the multi-modal Glasser parcellation are overlaid on the flat surface. The figure highlights the non-uniform distribution of perfusion scores across the cortex, with areas that have sharp gradient compared to their underlying perfusion score levels (e.g., LIPv and MT/MST).

Normative blood perfusion map on lateral and medial views of the inflated and 2D flat cortical surfaces (fsLR). Borders and areal names of the multi-modal Glasser parcellation are overlaid on the flat surface. The figure highlights the non-uniform distribution of perfusion scores across the cortex, with areas that have sharp gradient compared to their underlying perfusion score levels (e.g., LIPv and MT/MST).

How does cerebral #BloodPerfusion map onto micro-, meso- & macro-scale brain structure? @asafarahani.bsky.social @misicbata.bsky.social &co characterize blood perfusion in the #HumanBrain, revealing how it changes with age & in #NeurodegenerativeDisease @plosbiology.org 🧪 plos.io/46AEURS

8 months ago 9 7 0 0
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Benchmarking methods for mapping functional connectivity in the brain | doi.org/10.1038/s415...

What is the best measure of functional connectivity (FC)?

led by @zhenqi.bsky.social in @natmethods.nature.com ⤵️

10 months ago 88 44 4 3
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Symposium talk: Integrating brainstem and cortical functional architectures

Friday June 27 3:45pm @ M2

9 months ago 8 2 1 0
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Poster #1198: Synaptome architecture shapes regional dynamics in the mouse brain

Friday + Saturday 1:45-3:45

9 months ago 6 2 1 0
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Poster #1187: Neurotransmission connectomes

Friday + Saturday 1:45-3:45

9 months ago 7 2 1 0
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Poster #1178: A simulated annealing algorithm for randomizing weighted networks

Friday + Saturday 1:45-3:45

9 months ago 6 2 1 0
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Poster #1176: Neuromorphic hierarchical modular reservoirs

Friday + Saturday 1:45-3:45

9 months ago 6 2 1 0
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Poster # 1766: Mapping neuropeptide signaling in the human brain

Friday + Saturday 1:45-3:45

9 months ago 5 1 0 0
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Poster #2122: Comprehensive profiling of anaesthetised brain dynamics across phylogeny

Friday, June 27 | 13:45 -15:45

Talk on Saturday 28th at 12:18

9 months ago 5 2 1 0
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Poster #1618: The impact of spherical projection on spin tests for brain maps

Friday + Saturday 1:45-3:45

9 months ago 5 1 1 0
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Poster #1461: Generative Model of Brain Maps

Friday + Saturday 1:45-3:45

9 months ago 5 1 1 0
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Poster #1188: Netneurotools: an accessible, reproducible, and practical toolkit for network neuroscience

Friday + Saturday 1:45-3:45

9 months ago 10 2 1 0
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Poster #1843: Neuromaps-mouse: integrating multiscale, multimodal annotations across the mouse brain

Friday + Saturday 1:45-3:45

9 months ago 8 2 1 0
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Symposium talk: Benchmarking methods for mapping functional connectivity in the brain

Friday, Jun 27: 3:45 PM - 5:00 PM

9 months ago 6 3 1 0
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