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Posts by Johannes Debler

We're hard at work to bring you another excellent #CBSMWA in 2026.

6 days ago 0 0 0 0
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Out doing something different at Science Meets Parliament in Canberra this week. #SMP2026

4 weeks ago 8 0 0 0
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Shiny!
www.instagram.com/reel/DV6Js56...

#Firefly

1 month ago 1 1 0 0

This whole situation has been handled terribly so far.

3 months ago 1 0 1 0

Too many superfluous robots in too many shots...

3 months ago 1 0 0 0

#plantscience #plantbiology #science

3 months ago 3 5 0 0

I remember when I uploaded some old pacbio data about 5 years ago it got flagged for containing 'pacbio control DNA', and was removed automatically. Which is why I was surprised so many assemblies if the ONT one made it through and got named as plasmids.

3 months ago 1 1 0 0

This stuff is polluting the databases because many technicians just add it because it's in the library prep protocol. That's why I bin it as soon as I receive a new kit. Are NCBI and ENA screening for this yet? If not, they certainly should! Also, do both institutions not have accounts here?!?

3 months ago 2 0 2 0
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I just recalled some older Nanopore data and started fixing the assembly when I came across a 'weird' contig. Blasting it generated a lot of almost perfect hits to 'plasmids' all across the tree of life. Turns out it was the spike in control DNA that comes with the ONT library prep kit...

3 months ago 4 2 1 0

Found another instance of my plasmid/virus, this time in sequencing data of Leptographium pseudotsugae, a fungal pathogen isolated from Oregon pine (Douglas fir). We're up to 11 fungal species carrying it. Still no clue what it is πŸ€·β€β™‚οΈ

4 months ago 4 0 0 0
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Had a lot of fun presenting our accidental finding of a circular DNA element in isolates of at least 10 different plant pathogenic fungal species at #strompath2025

4 months ago 5 0 0 0
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Leafy Boi 😊

5 months ago 0 0 0 0
10th Stromlo Plant Pathology Conference | wheatbiosecurity

Registrations for the Stromlo Plant Pathogen Conference #StromPath25 are rolling in fast and the program is now full!
Exciting lineup from Japan, Korea, USA, UK, NZ + strong local crew. Join us in Canberra β€” rego open until Nov 13.
Program available here tinyurl.com/3e3tx9j2

5 months ago 8 5 1 0

@tobybarilbio.bsky.social and I are very excited to release MycoMobilome! A very extensive effort to discover, QC and annotate TEs across the fungal kingdom.

πŸ‘‰ Ready-to-use for your own genome with a simple tutorial!
πŸ‘‰ Metadata about TEs discovered in your genome!
πŸ‘‰ Contribute and get recognition!

5 months ago 43 15 0 0

You spelled "Wil" wrong, as in @wilwheaton.net who also happens to have something interesting to share 😎 I'm excited!

6 months ago 4 0 0 0
The circular entity appears in yet another fungal species, this time in Cercospora sojina

The circular entity appears in yet another fungal species, this time in Cercospora sojina

Well hello there "entity" in yet another species 😎

6 months ago 2 0 0 0

@mcdonaldmeganc.bsky.social Meagon! I hear congratulations are in order! All the best 😊

7 months ago 1 0 0 0
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Incredible session from Professor Peter Solomon. Engaging and highly relevant to Australia’s wheat and plant pathogen landscape.
#CBSMWA #CBSMWA2025

7 months ago 4 2 0 0
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Dr. @jamespblloyd.bsky.social and @theccdm.bsky.social Dr. Liz Czislowski wrapping up the Biodiversity session at @cbsmwa.bsky.social with synthetic gene circuits for plants in space and novel nucleic acid based nanoparticle fungicides

7 months ago 3 2 0 1
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Having fun at @cbsmwa.bsky.social presenting work on "The Entity", a circular genetic element we keep finding in unrelated fungal plant pathogens. #cbsmwa @theccdm.bsky.social

7 months ago 9 2 0 0

Come see Peter at #CBSMWA on Friday and at @theccdm.bsky.social on Thursday :-)

7 months ago 4 1 0 0

Such a fun little conference!

7 months ago 0 0 0 0
10th Stromlo Plant Pathology Conference | wheatbiosecurity

Registrations are rolling in for the 2025 Stromlo Plant Pathology meeting in Canberra (Nov 27–28)! Secure your spot! Speakers: @yasukadota.bsky.social, Cecille Segonzac, @thamlab.bsky.social, @yichangsung.bsky.social, Tek Tay & @danielsyu.bsky.social. Register at tinyurl.com/3e3tx9j2
#strompath25

8 months ago 16 13 0 0
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Join us in our CBSM WA 2025 Biodiversity session with invited speaker Dr James PB Lloyd. His talk will focus on the threat of climate change to our global food security and the potential for programmable genetic systems as a solution.

8 months ago 3 1 0 0

West Australians, come join us at CBSM 2025!

8 months ago 0 0 0 0
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At CBSM WA in 2024 we heard from renowned parasitologist Prof Shookofeh Shamsi. Her presentation explored how overlooking parasites can lead to incomplete conclusions about biodiversity. Prof. Shamsi's vision is to create a world where professionals and public are well-informed about parasites.

8 months ago 1 1 0 0
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The CBSM 2024 trade exhibit provided students and researchers the opportunity to create meaningful connections with industry and to discuss the latest and greatest technology available!

Make sure to check out the trade exhibit at the 2025 meeting!

8 months ago 1 1 0 0

Unless by RNA seq they mean cDNA, then you probably could do it. If it's a good idea though is a different question altogether 😊

8 months ago 1 0 0 0

Just take a photo of the slide for later

9 months ago 1 0 0 0

"I'm thrilled to announce...." πŸ€¦β€β™‚οΈπŸ€¦β€β™‚οΈπŸ€¦β€β™‚οΈ

9 months ago 1 0 0 0