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Posts by Philmus Lab @ OSU

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An enhanced domestication method for uncultured bacteria Abstract. When environmental bacteria transition to laboratory conditions, a process termed domestication, the shift from the native habitat to a culture m

Most bacteria remain uncultured with vast microbial ‘dark matter’ awaiting discovery.. to address this am excited to share EDEN - an enhanced domestication method to grow uncultured bacteria & new diversity. Using EDEN we isolate a new species active against MDR pathogens..

doi.org/10.1093/isme...

1 day ago 44 17 0 0

Happy to share our latest work, 'Integrating targeted genome mining and structure-guided modeling reveals unexplored 7-deazapurine-containing pathways.' 1/n

www.biorxiv.org/content/10.6...

1 day ago 0 2 1 0
Assistant Professor x6 (111522-0426) - University of Warwick Title: Assistant Professor x6 (111522-0426). Application Deadline: . Position Type: Permanent

My super department @warwicklifesci.bsky.social is hiring 6 assistant profs in the wake of recent retirements. We're looking for people in microbiology/infection, cellular disease / immunity; environmental biology; and plant/crop science. #MicroSky warwick-careers.tal.net/vx/lang-en-G...

1 day ago 50 79 2 0

The @jgi.doe.gov is an amazing partner! I am grateful they have accepted some of our proposals as it has helped us immensely.

1 week ago 4 1 0 0

This maybe one of the few times I am OK with bringing back the middle ages! Looks like awesome work.

1 week ago 1 0 1 0
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Come to #Microbio26 poster 094 to hear all about natural product antimocrobial discovery from @tosinorababa.bsky.social and me #MicroSky

1 week ago 27 8 2 0
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Tetracenomycin Y, a plant growth-promoting tetracenedione from a rare actinomycete of the genus Acrocarpospora The Journal of Antibiotics - Tetracenomycin Y, a plant growth-promoting tetracenedione from a rare actinomycete of the genus Acrocarpospora

Tetracenomycin Y, a plant growth-promoting tetracenedione from a rare actinomycete of the genus Acrocarpospora | The Journal of Antibiotics rdcu.be/fc3BP

1 week ago 4 3 0 0
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Now out in @acs.org JACS Au, the manuscript by #BarbaraTerlouw et al. describing PARAS, a high-accuracy machine-learning algorithm to predict substrate specificities of nonribosomal peptide synthetase (NRPS) adenylation domains, key for estimating natural product structures from BGC sequence. 1/n

1 week ago 27 7 3 1
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Hacking 3D printers as laboratory robots The emergence of affordable and reliable 3D printers has enabled laboratories to optimize setups, print custom parts, accelerate research, and rapidly prototype. A new movement has emerged in the past...

How to make your own robot!
A review of people making awesome lab robots out of commercial 3D printers. Thank you @vsaggiomo.bsky.social and Sander for inviting me to help write this paper in @digital-discovery.rsc.org.

Beep boop! 🤖 #chemsky
doi.org/10.1039/D5DD...

3 weeks ago 43 22 3 2

Any chance they are offered as sweatshirts too?

3 weeks ago 0 0 1 0
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Skull and spine of presumably a deer in leaf litter

Skull and spine of presumably a deer in leaf litter

Seen on our walk today. I believe I am too far north for the #Chupacabra so cougar?

3 weeks ago 1 0 0 0
NOT-GM-26-002: Notice of NIGMS Participation in PA-25-422 "Ruth L. Kirschstein National Research Service Award (NRSA) Individual Predoctoral Fellowship (Parent F31)" NIH Funding Opportunities and Notices in the NIH Guide for Grants and Contracts: Notice of NIGMS Participation in PA-25-422

NIGMS is signed onto the F31 NOFO. grants.nih.gov/grants/guide...

1 month ago 47 27 3 2
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Highlights of cyanobacterial metabolites reported between 2021–2024 Covering: 2021 to 2024This review highlights cyanobacteria secondary metabolites reported between 2021 and 2024. Those compounds are categorised into major classes, including peptides, alkaloids, lipi...

Our highlight review on recently isolated cyanobacterial metabolites is out @natprodreports.rsc.org !🥳 Covers isolation, structure elucidation (analytical techniques, biosynthesis and total synthesis). Great work with @elisabethjanssen.bsky.social!
@chem.uzh.ch

pubs.rsc.org/en/content/a...

1 month ago 13 5 0 0

It was great to work with @nicoleavalonlab.bsky.social @danudwary.secondarymetabolism.com @eustaquiolab.bsky.social and Jimmy O @ucsdpharmacy.bsky.social colleagues Bill G and Arnaud T @jgi.doe.gov Drew D, and UF colleagues Yousong D and Hendrik L as well as @oregonstate.edu Shaz S (from our lab)

1 month ago 4 0 0 0
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Green genes from blue greens: challenges and solutions to unlocking the potential of cyanobacteria in drug discovery Cyanobacteria are prolific producers of biologically active compounds that are important in influencing ecology, behavior of interacting organisms, and as leads in drug discovery efforts. Here we…

🔓Don't miss this #OpenAccess Viewpoint by @philmuslab.bsky.social & co. discussing the challenges & solutions to unlocking the potential of cyanobacteria in drug discovery #secmet #natprod

Check it out in full below👇

1 month ago 5 3 0 1
Assistant Professor in Chemistry x2 (111367-0226) - University of Warwick Title: Assistant Professor in Chemistry x2 (111367-0226). Application Deadline: . Position Type: Permanent

2 x Assistant Professor in Chemistry University of Warwick - Department of Chemistry.

📍 Location: University of Warwick, UK
📅 Start date: AY 2026/2027
⏰ Deadline to apply: 8th April 2026

warwick-careers.tal.net/vx/appcentre...

1 month ago 7 12 0 0
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Automated genome mining predicts structural diversity and taxonomic distribution of peptide metallophores across bacteria Automated detection of metallophore biosynthesis reveals that metal-chelating non-ribosomal peptides are widespread, chemically diverse, and deeply rooted in bacterial evolution.

Automated genome mining predicts structural diversity and taxonomic distribution of peptide metallophores across bacteria

@elife.bsky.social by Zachary Reitz and Bita Pourmohsenin et al from @marnixmedema.bsky.social and @nadineziemert.bsky.social

elifesciences.org/articles/109...

1 month ago 10 3 0 0
Developing the NIH-Wide Strategic Plan for Fiscal Years 2027-2031

ACTION ITEM-----ACTION ITEM

Because of overwhelming demand, NIH has new links for the Strategic Plan webinars

March 16, 2026 12:30 - 1:30 pm | www.scgcorp.com/strategicpla...

April 8, 2026 2:30 - 3:30 pm | www.scgcorp.com/strategicpla...

NOTE: YOU HAVE TO RE-REGISTER IS YOU REGISTERED BEFORE

1 month ago 25 17 0 0
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Rethinking Natural Product Discovery: A Complex Epistemological Approach Linking Chemical Ecology and Pharmacognosy Global challenges such as health crises, biodiversity loss, and climate change demand a rethinking of natural product discovery. Despite advances in dereplication, metabolomics, and genomic sequencing...

Rethinking Natural Product Discovery: A Complex Epistemological Approach Linking Chemical Ecology and Pharmacognosy | Journal of Natural Products pubs.acs.org/doi/10.1021/...

1 month ago 11 2 0 0
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Now out in @natcomms.nature.com :
versions 2.0 of both BiG-SCAPE and BiG-SLiCE! With significant speed and accuracy increases, as well as new interactive functionalities.
Read the full paper here #openaccess:
www.nature.com/articles/s41...

1 month ago 39 20 1 2

Come join us again in a next round of this massive online open science community effort! 💪
Sign up using the link in the thread.
It’s great fun, and really helps the scientific community. What more can you ask? 🙂

2 months ago 13 8 0 0
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The MIBiG 5.0 Annotathon is coming soon, and registration is now open!

🧬 Does your research involve biosynthetic gene clusters? Do you love natural product biosynthesis? Do you have an interest in rare & exotic enzymes? We can use your help & expertise.

Register here 👉 forms.gle/C1cWcLHtrjT2...

2 months ago 26 21 1 5
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A set of genetic tools for use in Clostridioides difficile and related species The Clostridia are a phylogenetically diverse group of anaerobic, spore-forming bacteria that include species of medical, veterinary and industrial importance. The last two decades have seen major adv...

New paper from us.

If you're interested in genetic manipulation of Clostridia, we have a few new tools for you! 36 new plasmids - all available from @addgene.bsky.social

www.microbiologyresearch.org/content/jour...

#microsky

2 months ago 30 13 1 2

OK. Serious question. How many plant species do you work on? Everyday I swear I see a new leaf!

2 months ago 0 0 1 0
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I am SO incredibly excited to announce the launch of a global list of Inspiring Black Scientists. You can use this list to nominate and connect with researchers. Please share and join us in highlighting these outstanding scientists for #BlackHistoryMonth and beyond!

www.wiley.com/en-us/resear...

2 months ago 137 78 3 8

I'd watch a muppet show movie where the muppets infiltrate an academic conference.

2 months ago 1847 337 78 151
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Phylogeny‐Aware Metabologenomics Accurately Assigns Natural Products to Biosynthetic Gene Clusters We report a statistical approach for associating biosynthetic gene clusters with their cognate metabolites and demonstrate its unprecedented power for scalable natural product discovery. Notably, it ...

Phylogeny-­ Aware Metabologenomics Accurately Assigns
Natural Products to Biosynthetic Gene Clusters

@microbiotech.bsky.social by Judith Boldt et al from Ulrich Nübel and @drrolfmueller.bsky.social

enviromicro-journals.onlinelibrary.wiley.com/doi/pdf/10.1...

3 months ago 29 7 0 0

This position is still open. The Weisberg lab is recruiting a postdoc or Ph.D. student to study horizontal gene transfer in plant-associated microbial communities. Please see the job ad for more information and feel free to contact me if you have any questions!

3 months ago 24 33 0 0
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The image is the logo of the RABID (Research and training in global Arthropod-Borne Infectious Diseases) program.

The image is the logo of the RABID (Research and training in global Arthropod-Borne Infectious Diseases) program.

Very proud to announce that my baby is finally here!
This new program at UTMB will support a variety of training opportunities in medical and veterinary entomology. It will also focus on developing a broad network of partners interested in vector biology and ecology across the state of Texas.

3 months ago 20 4 2 1

Graduate school application season: Tip #3

In the current funding climate, find a program with 3-4 people you would be happy to complete your thesis with. Changes at the NIH have created instability. Minimize your risk.

3 months ago 1 1 0 0