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Posts by Jakob Troidl

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Preprint out arguing that we should build the techology to translate (compile) molecularly annotated connectomes into dynamics. I think this is incredibly important. arxiv.org/abs/2603.25713

3 weeks ago 49 16 4 2
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Data-Driven AI for Neuroscience Organizers Carsen Stringer, HHMI/Janelia Research Campus Srini Turaga, HHMI/Janelia Research Campus Atika Syeda, HHMI/Janelia Research Campus Fabian Sinz, University of Göttingen Alice Wang,

📢 Applications are open! This meeting brings together scientists using data-driven #AI to analyze + model neural circuits and uncover how the brain performs complex computations. 🧠

Apply by May 28 ➡️ janelia.news/NAI26

@computingnature.bsky.social @sinzlab.bsky.social @srinituraga.bsky.social

2 months ago 15 13 0 1
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Pleased to share our new paper forthcoming in @icwsm.bsky.social! We introduce a novel framework to measure value expressions in social media posts at scale, leveraging personalization to handle the inherent subjectivity of human values.
arxiv.org/abs/2511.08453

3 weeks ago 30 9 2 0

Check out @cfusterbarcelo.bsky.social's latest cool work! Domain shift, we are watching you 👀👀👀

1 month ago 8 4 0 0

that means you can still change the title 20 times ;)

1 month ago 1 0 1 0
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Graph neural networks recover interpretable circuit models from neural activity
saalfeldlab.github.io/flyvis-gnn/
@HHMIJanelia
@AllenInstitute
to be presented at @CosyneMeeting

1 month ago 6 3 0 0

Looking forward to presenting our work on connectome-constrained modeling at #cosyne2026

1 month ago 10 1 0 0
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Scientific Paper Planner - AI-Powered Research Planning Structure your scientific research with AI-powered guidance. From hypothesis to methodology, plan your research paper with intelligent mentoring.

In two hours we (with gunnar blohm and jordan matelsky) will run a webinar talking about our philosophy for doing good science and becoming good at science. And the tool planyourscience.com I wrote to help. If you want to join us you can sign up here:t.co/OJOQe1Ly18

1 month ago 14 2 1 0
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Made it across the pond to Heidelberg for the AI & Biology conference at EMBL, then Lisbon for COSYNE. Looking forward to catching up with people and talking connectomics, AI for bio-image analysis, and more.

1 month ago 5 0 0 0

We opened 4 PhD positions at @humantechnopole.bsky.social together with Polimi (see 👇).

My lab offers a PhD project on "Computational Morphogenesis": use state-of-the-art machine learning methods together with realistic simulations to build digital twins of developing tissue.

Apply by March 26.

1 month ago 21 12 1 0

From @bdpedigo.bsky.social: a super efficient, highly reliable, and very generalizable method for mesh structure classification, applied here to spine detection across basically every synapse onto a cell in the MICRoNS dataset.

2 months ago 15 8 0 0

Very cool work, congrats!

1 month ago 2 0 0 0
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Accelerating Innovation in Biology HHMI’s $500 million over the next 10 years will support AI-driven projects and embed AI systems throughout the scientific process in labs across HHMI.

Join us in building foundational datasets and models for microscopy with @jakobtroidl.bsky.social and many others

AI Engineer Pre-Training: lnkd.in/eyEEV5nm
AI Engineer Post-Training: lnkd.in/eShVQ3y9
Data Engineer Data: lnkd.in/eCvm58xH
Data Engineer Pipelines: lnkd.in/ec6qGJkX

ai.hhmi.org

1 month ago 14 8 0 0