Preprint out arguing that we should build the techology to translate (compile) molecularly annotated connectomes into dynamics. I think this is incredibly important. arxiv.org/abs/2603.25713
Posts by Jakob Troidl
📢 Applications are open! This meeting brings together scientists using data-driven #AI to analyze + model neural circuits and uncover how the brain performs complex computations. 🧠
Apply by May 28 ➡️ janelia.news/NAI26
@computingnature.bsky.social @sinzlab.bsky.social @srinituraga.bsky.social
Pleased to share our new paper forthcoming in @icwsm.bsky.social! We introduce a novel framework to measure value expressions in social media posts at scale, leveraging personalization to handle the inherent subjectivity of human values.
arxiv.org/abs/2511.08453
Check out @cfusterbarcelo.bsky.social's latest cool work! Domain shift, we are watching you 👀👀👀
that means you can still change the title 20 times ;)
Graph neural networks recover interpretable circuit models from neural activity
saalfeldlab.github.io/flyvis-gnn/
@HHMIJanelia
@AllenInstitute
to be presented at @CosyneMeeting
Looking forward to presenting our work on connectome-constrained modeling at #cosyne2026
In two hours we (with gunnar blohm and jordan matelsky) will run a webinar talking about our philosophy for doing good science and becoming good at science. And the tool planyourscience.com I wrote to help. If you want to join us you can sign up here:t.co/OJOQe1Ly18
Made it across the pond to Heidelberg for the AI & Biology conference at EMBL, then Lisbon for COSYNE. Looking forward to catching up with people and talking connectomics, AI for bio-image analysis, and more.
We opened 4 PhD positions at @humantechnopole.bsky.social together with Polimi (see 👇).
My lab offers a PhD project on "Computational Morphogenesis": use state-of-the-art machine learning methods together with realistic simulations to build digital twins of developing tissue.
Apply by March 26.
From @bdpedigo.bsky.social: a super efficient, highly reliable, and very generalizable method for mesh structure classification, applied here to spine detection across basically every synapse onto a cell in the MICRoNS dataset.
Very cool work, congrats!
Join us in building foundational datasets and models for microscopy with @jakobtroidl.bsky.social and many others
AI Engineer Pre-Training: lnkd.in/eyEEV5nm
AI Engineer Post-Training: lnkd.in/eShVQ3y9
Data Engineer Data: lnkd.in/eCvm58xH
Data Engineer Pipelines: lnkd.in/ec6qGJkX
ai.hhmi.org