I was invited by @focalplane.bsky.social to write a short description about it:

focalplane.biologists.com/2025/12/12/a...

Do you enjoy exploring embeddings interactively as much as I do? Check out _embeddoor_! I recently vibe-coded it while watching too many Harry Potter movies 😃
Feedback welcome as more features will certainly come! github.com/haesleinhuep...

I just discovered the “variable graphics memory” option from AMD and Intel and I’m super curious has anyone here tried using it to use your PC’s RAM as GPU memory for AI models?
#GloBIAS #Bioimage #Bioimage_analysis #napari #Microscopy #BioimageAnalysis

Updates:
• Script now reports trained class count
• Choose output classes (ImageJ/Napari-ready)
• Writes slices incrementally to save RAM
• One script for classification & probability

GitHub - AlexHego/DL-pixel-classification Contribute to AlexHego/DL-pixel-classification development by creating an account on GitHub.

Great to see @alexhego.bsky.social share instructions on a DL pixel‑classification problem we worked on at image.sc. If you’re working on a challenging 3D DL semantic‑segmentation problem and need more options than most tools provide, check out this repository. github.com/AlexHego/DL-...

Next #GloBIAS seminar coming up. Curtis Rueden will present on 'Fiji with Python power'. To get the link please register here: www.globias.org/activities/b...

I regret to announce that the meme Turing Test has been passed

LLMs produce funnier memes than the average human, as judged by humans. Humans working with AI get no boost (a finding that is coming up often in AI-creativity work) The best human memers still beat AI, however. arxiv.org/abs/2501.11433

Schematic overview on how MicroSpit operates. It can split superimposed structures in fluorescent image channels by using a suitably trained AI.

Concrete example for how MicroSplit unmixes four superimposed structures.

Immagine you could image two cellular structures in the same fluorescent channel and still reliably get them separated afterwards…
What would you do with this?

Now… what would you do if that also worked with 4 structures at once? 👇 #MicroSplit #preview🧵

🚨 Save the Date! 🚨
AI4Life & @globias.bsky.social are hosting a 4-part webinar series to showcase AI4Life services and lessons learned.

📅 When: Feb 13, Apr 10, Jun 12, Aug 14
🖥️ How: Online | 🎥 Recorded
🔗 Registration: bit.ly/registration...

Our work, MedicoSAM, is now on arXiv! We study finetuning SAM for medical images. MedicoSAM improves over SAM and models derived from it, especially for interactive segmentation, see examples in the figure. Preprint at arxiv.org/abs/2501.11734.
Read on for a summary. @anwaiarchit.bsky.social

Call 4 Help Pilot Event by GloBIAS, 22 Jan–5 Feb 2025! Offering life scientists a chance for hands-on guidance & support for #bioimage_analysis using Napari, Ilastik & CellProfiler.
💡 Details: www.globias.org/activities/c...
🔗 Sign up! Application until Friday 17 Jan: forms.gle/7hsJgramrFXB...

Still relevant! Back in 2021, I made this GIF ( a movie on Bluesky because I don’t know how to publish GIF) to help researchers decide between confocal Airyscan 1 and SIM for imaging S. aureus. #Microscopy #fluorescence #confocal #airyscan #Elyra

Sorry for the credit I screen it few month ago and I forget to save the entire post. 🤦‍♂️.

Thank you for your animation!! It’s so helpful

Do you have any ressources to teach spatial analysis, eCDF, Ripley function, clustering algorithms Tsne, UMAP, etc
And what did you use QuPath, CytoMAP, Python, R ? #BiaTools #Globias #spatial #clustering #Neubias

I got inspired by @guijacquemet.bsky.social's idea of making regular posts on #bioimageanalysis tools and tips under #BIATooloftheday. Will try to complement his suggestions with as little overlap as possible under #BIAToolTip with a focus on #Fiji and #ImageJ and friends.
In the hope it helps

Twitter is so empty these days, I thought I heard an echo… So I joined Bluesky yesterday.

Im too late ?