SeqFu labs: Stats MacOS app YouTube video by Andrea Telatin

What about a GUI for Seqfu Stats?

www.youtube.com/watch?v=xX44...

SeqFu dev - preview of `seqfu less` [coming with 1.24.0] YouTube video by Andrea Telatin

Meet seqfu less

youtu.be/e77tXBM6fRs?...

SeqFu is brewing a new interactive tool that improves the existing ‘SeqFu view’…

Release Next time I'll try to be FASTA · tseemann/any2fasta New features Option -k is keep processing even when some inputs fail option -g to include GBK version suffix option s to strip desc from>id desc in ID lines Support for PDB protein structure forma...

💾 any2fasta 0.8.1 is released!

The FASTA format is now 40 years old (Pearson & Lipman) and any2fasta makes it easy for your scripts and pipelines that accept FASTA to also accept other formats, even if compressed! eg. .gbk.gz

#bioinformatiocs #microbiology #genomcs
github.com/tseemann/any...

New book shares Quadram’s Best Practice in Microbiome Research - Quadram Institute Researchers from the Quadram Institute have developed an open access book to help ensure best practice in microbiome research.

The Best Practice in Microbiome Research presents protocols covering the design of ethical, inclusive studies, sample collection and genomic sequencing, bioinformatics processing of data and statistical analysis.

Maria Traka brings UK leadership to ELIXIR Food & Nutrition Community In March 2025, Dr Maria Traka was appointed as the new co-Lead of the ELIXIR Food & Nutrition Community, joining Dr Jildau Bouwmann (ELIXIR Netherlands) ...

🎁 5 Community leadership
UK Node member Maria Traka (@quadraminstitute.bsky.social) was elected co-lead of the ELIXIR Europe Food and Nutrition Community, strengthening UK leadership at European level

🔗 elixiruknode.org/news/2025/ma...

#adventcalendar #leadership

Announcing myloasm, a new long-read (ONT R10/PacBio) metagenome assembler that I've been working on during my postdoc in the Heng Li lab (@lh3lh3.bsky.social).

myloasm-docs.github.io

Lmao 🤣 savages

Shebang - Pixi by prefix.dev None

Pixi has shebang support like uv now! 😍
```
#!/usr/bin/env -S pixi exec --spec bat -- bash -e
```

pixi.sh/dev/advanced...

Vacancy social card for a Group Leader position, seeking a scientist with a research focus on bacterial foodborne pathogens or microbial spoilage. Competitive salary and support package offered. Apply by 14 April 2025.

Are you a forward-thinking scientist with expertise in bacterial foodborne pathogens or microbial spoilage? 🦠

Check out our current Group Leader vacancy ⤵️

💷 Competitive salary and support package
🗓️ Apply by 14 April 2025
➡️ buff.ly/ml6AT1G

Screenshot of the linux terminal running "seqfu view"

Did you know that you can have a quick peek at FASTQ qualities with `seqfu view`?

You can pipe it to less to scroll the whole dataset:

seqfu view FILE.fastq | less -SR

#seqfuTips #bioinformatics