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Posts by Ruben Tesoro

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You now have until 10 March to submit your abstract for #EESMechanobiology: https://s.embl.org/ees26-06-bl

The meeting will focus particularly on early-career researchers, inspiring and fostering collaborations to expand our knowledge of mechanobiology across kingdoms. 🌳🧬

Dates: 9 – 12 June 2026

1 month ago 4 1 0 2
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Happy to share that ShapeEmbed has been accepted at @neuripsconf.bsky.social πŸŽ‰ SE is self-supervised framework to encode 2D contours from microscopy & natural images into a latent representation invariant to translation, scaling, rotation, reflection & point indexing
πŸ“„ arxiv.org/pdf/2507.01009 (1/N)

6 months ago 71 26 3 5
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So squeezed it can barely move 🦠

Some TIRF imaging of fibroblast, tagged with lifeact-GFP. Any guesses why the cell so bleby? πŸ‘€πŸ‹οΈ

5 months ago 0 0 0 0
FIB-SEM dataset visualized with Microscopy Nodes, data from Mocaer et al 2023

FIB-SEM dataset visualized with Microscopy Nodes, data from Mocaer et al 2023

Microscopy Nodes is now up on bioRxiv! πŸš€

This is a Blender extension that seamlessly integrates and visualizes 3D microscopy data (TIF & @zarr.dev).

High-quality volume rendering for anyone, in both EM and fluorescence, regardless of computational expertise! πŸ”¬

www.biorxiv.org/content/10.1...

1 year ago 333 124 9 12
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1 year ago 0 0 0 0
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Tried dynamic micropatterning last week!

These 3t3s don’t polarise as nicely as the beautiful movies from @ivaskalab.bsky.social but they still look fun! 🍳

More to come next year ! πŸ‘€πŸŽ„

1 year ago 2 0 1 0