Please join us tomorrow morning (9 AM CEST) to hear about Rocío Mozo Muñoz's work on the phylogenomics of Symbiodiniaceae (from the lab of @fonamental.bsky.social)

#protistsonsky

Oxygen as a primary selective pressure for photosymbiosis evolution www.sciencedirect.com/science/arti... #symbiosis

TreeProfiler: large-scale metadata profiling along gene and species trees academic.oup.com/mbe/article/...

Another great edition of the #Metabarcoding in #MicrobialEcology course is coming to an end!

A big thank you to our fantastic instructors Anna, Luigi & @fonamental.bsky.social & to all the participants who joined us this week (we’re missing a few in the group photo!)🚀

White syndrome dynamics in Porites cylindrica: interactions among eutrophication, host structure, and microbial communities www.biorxiv.org/content/10.6... #corals #microbiome #holobiont

NF-κB: A Diverse and Multi-Functional Transcription Factor in Holozoans Abstract. Transcription factor nuclear factor-kappa B (NF-κB) and many upstream signaling components have been identified in a diversity of holozoan taxa,

NF-κB: A Diverse and Multi-Functional Transcription Factor in Holozoans academic.oup.com/mbe/advance-...

From Permits to Samples: Addressing Key Challenges for High‐Quality Reference Genome Generation in Europe High-quality reference genome assemblies have become essential for deepening our understanding of biodiversity, yet obtaining them for many species remains surprisingly challenging. Drawing on experi...

How do you turn many individual experiences, workflows, and challenges into something the whole community can use?

Watch Katja Reichel explaining the writing of doi.org/10.1111/1755...

Link: youtu.be/80cedW-Oc6c

#Genomics #Biodiversity #ReferenceGenomes #ERGA

Protozoan predation selects for key symbiotic traits in an environmentally transmitted beneficial symbiosis www.biorxiv.org/content/10.6... #symbiosis #protists

@fonamental.bsky.social kicking off the 10th edition of the #Metabarcoding in #MicrobialEcology workshop with Anna Sandionigi, Luigi Borruso and a great cohort of participants!

They are gonna learn bioinformatic processing of NGS data and key multivariate stats through lectures & hands-on exercises

OrthoGarden: a Pipeline for Propagating Phylogenetic Trees for Non-Model Organisms from Short Reads and de novo Genome Assemblies academic.oup.com/mbe/advance-...

Widespread symbiosis of ciliate epibionts colonizing gills of shrimps inhabiting vents and seeps across the Pacific Ocean biorxiv.org/content/10.64898/2026.02.27.708428v1.full #symbiosis #protists

A Comparative Analysis of Long-Term Effective Population Sizes Across Eukaryotes onlinelibrary.wiley.com/doi/10.1111/...

Genome modelling and design across all domains of life with Evo 2 www.nature.com/articles/s41...

High-quality metagenome assembly from nanopore reads with nanoMDBG www.nature.com/articles/s41...

Spatial transcriptomics maps host–gut microbiome biogeography at high resolution www.nature.com/articles/s41... #microbiome

Planetary microbiome structure and generalist-driven gene flow across disparate habitats www.sciencedirect.com/science/arti... #microbiome

A metabolism-chromatin axis promotes differential ribosomal RNA transcription in the human malaria parasite www.nature.com/articles/s41... #symbiosis

Towards a genomic understanding of the tree of life Anja Spang, Davide Pisani; Towards a genomic understanding of the tree of life, Molecular Biology and Evolution, , msag043, https://doi.org/10.1093/molbev/

Towards a genomic understanding of the tree of life academic.oup.com/mbe/advance-...

Tara Pacific_Inmersión y toma de muestras con Sylvian Agostini, Pete West - Fondation Tara Océan

Expedición Tara Coral 🪸🌊

El investigador del @ibe-barcelona.bsky.social Javier del Campo, participa en la expedición internacional de @fondationtaraocean.bsky.social para estudiar la resiliencia de los corales frente al cambio climático en el Triángulo de Coral. 🧬

👉https://shorturl.at/UpUBc

Fondation Tara Océan

Tara Coral 🪸🌊

L’@ibe-barcelona.bsky.social  participa en una expedició internacional al Triangle de Coral per estudiar la resiliència dels coralls al canvi climàtic.

L’equip de Javier del Campo investigarà el microbioma dels coralls. 🧬

Més aquí👉https://shorturl.at/UpUBc

From microbes to animals: a review on prey choice and prey–predator dynamics across organismal scales academic.oup.com/femsre/artic...

Coral microbiomes as reservoirs of unknown genomic and biosynthetic diversity www.nature.com/articles/s41... #coral #microbiome

Microbial Metabolism and Disease Virulence Changes Across Day and Night in Coral Black Band Disease Lesions enviromicro-journals.onlinelibrary.wiley.com/doi/10.1111/... #coral #microbiome #holobiont

The MicrobeAtlas database: Global trends and insights into Earth’s microbial ecosystems www.sciencedirect.com/science/arti... #microbiome

Huge news 🌍🧬
The Protist 10,000 Genomes Project is joining the Earth BioGenome Project.
Protists may represent the majority of eukaryotic diversity — yet only a tiny fraction have reference genomes.
Time to change that. 🚀✨
Learn more 👉 ngdc.cncb.ac.cn/p10k/
#EBP #Protists #Genomics #TreeOfLife

Thanks to all co-authors including my undergraduate mentee Kay Li (first pub!), as well as @fonamental.bsky.social & @pjkeelinglab.bsky.social! Thanks also to @sicb.bsky.social for supporting this symposium article 🙌

Endosymbiotic Apicomplexans of Marine Holobionts: Microbial Parasites in a Warming Ocean Synopsis. Apicomplexans are a large group of protists, including several species of major medical importance, most notably those which cause malaria and to

If you're looking for some fun weekend reading, check out our recent review on marine apicomplexans, out now in ICB (@sicbjournals.bsky.social)! #ProtistsOnSky

Los corales también duermen por la noche Los llaman los "arquitectos de los ecosistemas marinos" porque sus arrecifes sirven de cobijo a muchísimas especies. También duermen de noche como los humanos.

¿Sabías que los corales también duermen por la noche? 🪸

🎧 Javier del Campo (@fonamental.bsky.social) habla de su investigación en el @ibe-barcelona.bsky.social en 📻Españoles en la mar.

#DescifrandoEvolución
👉

HiMBar: A High-Fidelity Metagenomic Barcoding Approach for Transkingdom Species Detection and Interaction Analysis in Aquatic Ecosystems onlinelibrary.wiley.com/doi/10.1111/...

Heat-stressed #corals and the important role of picoplankton-derived nitrogen link.springer.com/article/10.1...