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Posts by Stephanie Hicks

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Excited to be inducted as Fellow of the American Institute for Medical and Biological Engineering! Advocacy for the #medical and #biological #engineering #sciences is more important now than ever. Thank you #AIMBE! 🧬 🧪 🖥️ @aimbe-official.bsky.social

www.bme.jhu.edu/news-events/...

21 hours ago 20 2 1 0

I just discovered Quarto (genuine thanks to reviewer 2) and I LOVE IT so much. Anyone who is analyzing data and is not using it should be using it. I sent a general slack message to my lab to start using it immediately. #science #data #bioinformatics

6 days ago 8 1 1 0

it's the end of an era

2 weeks ago 1 0 1 0
NOT-OD-26-064: Update of NIH Late Application Submission Policy and End of Continuous Submission NIH Funding Opportunities and Notices in the NIH Guide for Grants and Contracts: Update of NIH Late Application Submission Policy and End of Continuous Submission NOT-OD-26-064. NIH

What?!!!!! They are ending continuous submission? grants.nih.gov/grants/guide...

2 weeks ago 14 6 4 0

Incredibly excited to see this project out! Huge congratulations to the entire team. 🥳

Thank you so much to the donors and their families for enabling this work and thank you to the generous funding that supported the work too!

1 month ago 6 1 0 0
STATGEN 2026: Conference on Statistics in Genomics and Genetics STATGEN 2026: Conference on Statistics in Genomics and Genetics, May 18-20, 2026. ASA Section on Statistics in Genomics and Genetics.

Consider submitting an abstract for an invited talk or poster at STATGEN 2026 by December 15th!

Amazing keynote speakers and statistical leaders in #genetics and #genomics! 👏

Hope to see you there! statgen26.emory.edu

🧪 🧬 🖥️ 🧠 #statssky #imaging #SingleCell #spatial #omics #DigitalPathology

4 months ago 10 7 0 1

I am very excited to share this book! It has been so much to collaborate on the project. We hope you find it useful!

4 months ago 22 7 0 0

🧪 🧬🖥️ 🧠 #neuroskyence #StatsSky #WomenInSTEM #Autism

5 months ago 4 1 0 0
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Very excited to share that Department of Biomedical Engineering @hopkinsengineer.bsky.social is hiring for open rank tenure-track faculty in #Biomedical #DataScience!

🔗 apply.interfolio.com/177042
Apps starting to be reviewed Dec 5 and ongoing after!

🧪🧬🖥️🧠 #StatsSky #WomenInSTEM

5 months ago 26 19 0 0
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Thank you yes apologies for the confusion!

5 months ago 0 0 0 0

Adding that you are still encouraged to apply even if you can't hit the Nov 15th date! It's just the date we plan to start reviewing, but we'll definitely continue reviewing for some time.

5 months ago 1 1 1 0
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Come work with me! @jhubiostat.bsky.social is hiring for a tenure-track Assistant Professor position 🥳 Apps due Nov 15

🔗 apply.interfolio.com/176686

🧪🧬💻🧠 #StatsSky #WomenInSTEM

5 months ago 16 15 1 0
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Looking for postdoctoral opportunities? ✅

Interested in working with me or any of the 30 other amazing @jhubiostat.bsky.social faculty? ✅

If yes, I encourage you to apply to our postdoc program in #DataScience and #AI in #Health and #Medicine!

🔗 apply.interfolio.com/174430

🧪🧬💻🧠

5 months ago 8 7 0 0

This was a really fantastic collaboration! Congratulations @mictott.bsky.social Rita Cervera Juanes,
@svitlanabach.bsky.social and all co-authors! 🧪🧬💻🧠

7 months ago 11 4 1 0

Congratulations to @prashanthi-ravi.bsky.social @svitlana-bach.bsky.social & all co-authors! Wonderful collab btw @alexisbattle.bsky.social and @martinowk.bsky.social @kr-maynard.bsky.social spatially profiling human nucleus accumbens 🧠 #TeamScience 🧪 🧬 🖥️

Thank you #NIH #NIDA for generous funding 👏

7 months ago 18 4 0 0

Thank you for the invitation @sib.swiss! I really enjoyed talking with everyone and I learned a lot over the last few days. I highly recommend this conference to anyone working in Bioinformatics. 🧬🧪💻

7 months ago 16 2 1 0

Thank you so much @mikelove.bsky.social!

8 months ago 2 0 0 0
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Congratulations @kinnaryshah.bsky.social @mictott.bsky.social @svitlanabach.bsky.social & all co-authors! Wonderful collab btw @jhubiostat.bsky.social @jhu.edu and @lieberinstitute.bsky.social spatially profiling human dACC 🧠 #TeamScience 🧪 🧬 🖥️

Thank you #NIDA #NIMH for generous funding & support 👏

8 months ago 9 2 0 0
Translating the face-paced world of research in deep learning and genetics and genomics to the classroom – Stephanie C. Hicks, PhD

Excited to share a blogpost summarizing challenges, opportunities & reflections from a course @hopkinsengineer.bsky.social co-taught with @alexisbattle.bsky.social (and huge support from Seraj Grimes!) at the intersection of #deeplearning #genetics #genomics 🧪 🧬 💻

stephaniehicks.com/blog/course-...

9 months ago 30 13 2 0
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Characterizing efficient feature selection for single-cell expression analysis Abstract. Unsupervised feature selection is a critical step for efficient and accurate analysis of single-cell RNA-seq data. Previous benchmarks used two d

Benchmarking study of single-cell feature selection finds deviance to be an effective criterion: doi.org/10.1093/bib/... . Try it yourself with our ( @kstreet.bsky.social @stephaniehicks.bsky.social @davi1893.bsky.social ) scry package @bioconductor.bsky.social : doi.org/doi:10.18129... #genomics

9 months ago 12 2 0 0
Vince Carey opening GBCC2025 with a slide highlighting Bioconductor’s technical and community advances.

Vince Carey opening GBCC2025 with a slide highlighting Bioconductor’s technical and community advances.

Charlotte Soneson delivering her keynote titled “From classes to community: how Bioconductor has advanced my research.”

Charlotte Soneson delivering her keynote titled “From classes to community: how Bioconductor has advanced my research.”

Slide showing GBCC2025 sponsors and supporters - CZI, Limagrain, GalaxyWorks, Bristol Myers Squibb, R Consortium, Gigascience, ELIXIR, NHGRI

Slide showing GBCC2025 sponsors and supporters - CZI, Limagrain, GalaxyWorks, Bristol Myers Squibb, R Consortium, Gigascience, ELIXIR, NHGRI

Large group photo of GBCC2025 attendees outdoors at Cold Spring Harbor Laboratory, smiling and gathered on the steps.

Large group photo of GBCC2025 attendees outdoors at Cold Spring Harbor Laboratory, smiling and gathered on the steps.

Big thanks to everyone who made #GBCC2025 a fantastic week of science, collaboration, and community!

Highlights for Bioconductor included keynotes, hands-on projects, and great conversations 💻🧬

@galaxyproject.bsky.social @bioconductor.bsky.social

9 months ago 9 3 0 0

Very excited to see this important work out led by the talented @mictott.bsky.social @boyiguo.bsky.social @jhubiostat.bsky.social! 🧪🧬🖥️

10 months ago 22 5 1 0
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Genetics and Genomic Sciences External Seminar Series | Stephanie Hicks, MA, PhD

Looking forward to visit Icahn School of Medicine at Mount Sinai tomorrow morning. If you are around NYC and are interested in single cell / spatial genomics, the talk starts at 10am. Hope you see you there! 🧪🧬🖥️

events.mountsinaihealth.org/event/geneti...

10 months ago 2 0 0 0
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Kinnary Shah is a fourth-year PhD candidate and co-president of the Biostats Student Org. Learn more about Kinnary and two of her ongoing research projects, one with the @lieberinstitute.bsky.social, and one with @stephaniehicks.bsky.social, on our website:
publichealth.jhu.edu/departments/...

10 months ago 11 5 0 0

Thank you Amy!

11 months ago 1 0 0 0
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New paper out in @genomeresearch.bsky.social on using contrastive self-supervised learning for spatial domain detection with multi-omics data! Huge congratulations to Jianing Yao and coauthors Jinglun Yu, Brian Caffo Stephanie Page & @martinowk.bsky.social! 🧬 🖥️ 🧪

doi.org/10.1101/gr.2...

11 months ago 20 4 1 0
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a cartoon character from the movie monsters inc is asking is it hard to stay awake ? nap time . ALT: a cartoon character from the movie monsters inc is asking is it hard to stay awake ? nap time .

New article is out! Sleep deprivation is bad for the brain transcriptome, but how quickly can a little sleep reverse this effect? A team effort and fun collaboration with @stephaniehicks.bsky.social (a thread) pubmed.ncbi.nlm.nih.gov/40315180/

11 months ago 28 10 4 1
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Stephanie Hicks named fellow of the American Statistical Association Hicks was recognized for her professional contributions, leadership, and commitment to the field of statistics.

Congratulations to Malone Center affiliate member @stephaniehicks.bsky.social on this distinction from @amstatnews.bsky.social!

11 months ago 40 12 2 3
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. @stephaniehicks.bsky.social giving a master class on spatial genomics analysis - normalization and qc are essential to reveal the underlying biology! #bog25

11 months ago 24 4 0 0
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The synaptic hypothesis of schizophrenia version III: a master mechanism - Molecular Psychiatry Molecular Psychiatry - The synaptic hypothesis of schizophrenia version III: a master mechanism

I really enjoyed this article: The synaptic hypothesis of schizophrenia version III: a master mechanism! 🧪🧠 #neuroskyence

www.nature.com/articles/s41...

h/t @boyiguo.bsky.social

11 months ago 16 2 0 1