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Posts by Rodrigo Granjel

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Resurrecting habitat fragmentation as a process over time Habitat loss and fragmentation occur over time. Despite this truism, understanding the effects of habitat fragmentation has, in recent years, predominantly focused on interpreting snapshots of current...

Excited to share a new article from the lab & wonderful co-authors.

We argue that habitat fragmentation research needs to be recalibrated to focus on changes over time.

We hope that doing so will advance understanding, isolate attribution, and diminish heated debate.

www.cell.com/trends/ecolo...

1 day ago 47 24 2 2
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You need to make AI guidelines for your lab Here's why you should, and how to start

I wrote about why every lab should have AI use guidelines, and how to do it.

open.substack.com/pub/blekhman...

2 weeks ago 181 57 3 8
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My new piece "Reproducibility: how to strengthen a weak foundation" is out today @nature.com! 🎉 How reproducible is research in the social & behavioural sciences? A new study by Miske et al. assessed 600 papers across 62 journals: the results are sobering.

📄 doi.org/10.1038/d415...
📄 rdcu.be/fbcq5

2 weeks ago 47 25 1 0

Next piece of exciting news coming soon from the #ResponseDiversityNetwork !

Never been a better time to sign up:
responsediversitynetwork.github.io/RDN-website/

@acekl.bsky.social @fwindsor.bsky.social @hillebr1.bsky.social @elinakaarlej.bsky.social @owpet.bsky.social @giuliaghedini.bsky.social

3 weeks ago 9 5 0 0

Happy to share the final version of @oliviamghosh.bsky.social's paper on inferring low dimensional phenotype-fitness maps from high-throughput fitness measurements across environments. Fun collaboration with @oliviamghosh.bsky.social, @grantkinsler.bsky.social, & @petrovadmitri.bsky.social

3 weeks ago 41 17 0 0
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Our new experimental evolution study across 30+ locations using the plant Arabidopsis thaliana —— we direct "see" adaptation and extinction to different climates at the genetic as it happens!

Read it in Science
dx.doi.org/10.1126/scie...

@ucberkeleyofficial.bsky.social
@hhmi-science.bsky.social

3 weeks ago 177 104 1 8
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🦗Insect herbivores promote plant species richness in restored grasslands in a long-term experiment.

🔍 Article: buff.ly/CwvQBpn

3 weeks ago 17 8 0 1
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Out now in Methods in Ecology and Evolution: Accounting for spatial interactions in the upscaling of ecosystem services. Led by Lari Boesing. A how to guide to upscaling ES, particularly those driven by the movement of matter and mobile organisms besjournals.onlinelibrary.wiley.com/doi/10.1111/...

4 weeks ago 22 11 1 0
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Today I’m excited to finally start a project I’ve been wanting to launch for a long time: Color for #Geoscience. 🎨🌍

ℹ️ to build an open, community‑driven collection of palettes
📄 Contribution: github.com/dominicroye/...
🌐 APP dominicroye.github.io/color-for-ge...

#ScientificVisualization #dataviz

1 month ago 82 26 2 1
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The "Ecological Monographs" editorial board is growing! We're now accepting applications from ecologists interested in serving as subject-matter editors🙋

Visit our website for more information:
esa.org/publications...

And fill out this form to apply: www.surveymonkey.com/r/P8R8CTX

1 month ago 10 11 0 3
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🌳 Do you want to contribute to research on how humans perceive forests? Take this quick, anonymous 10-min survey 🌲

👉 www.biodiful.org#/forest

This will help us explore how people experience forest biodiversity!

Please share on 🦋 & tag @biodiful.bsky.social to reach more participants 🙏💚

🌐🌍🦤🦑🪴🍁🧪

1 month ago 523 620 41 79
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Many journals require data and code sharing. Yet code is still rarely shared and datasets are often hard to reuse.

Our new paper introduces the @sortee.bsky.social guidelines for data & code quality control in ecology & evolution, developed by 26 experienced data editors.

📄 doi.org/10.24072/pcj...

1 month ago 88 62 1 1
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GitHub - benjamin-rosenbaum/BayesFR: Fitting functional responses in 1 and 2-prey systems Fitting functional responses in 1 and 2-prey systems - benjamin-rosenbaum/BayesFR

I have written my first R-package for feeding experiments! BayesFR allows fitting functional responses by providing dynamical prediction models for use in #brms. Includes models for classical type 2 and type 3 responses, and also prey mortality or predator interference (more to come) #Rstats (1/3)

1 month ago 28 11 2 0
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Summer School on Stochastic Population Dynamics led by Alex Hening. A great opportunity for anyone interested in learning about stochastic methods and their applications to population dynamics.

stochasticsummerschool.com

www.mathprograms.org/db/programs/...

Please repost.

1 month ago 11 13 0 0
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📊🌱 Hoy #8M lanzamos encuesta sobre #cuidados y carrera científica en #ecología.
¿Quién cuida en la comunidad científica?
¿Cuánto tiempo implican esos cuidados?
¿Influyen en las trayectorias investigadoras?
Si trabajas en ecología, cuéntanos 👇

aeet-comisionigualdad.limesurvey.net/485287?lang=...

1 month ago 31 30 1 4
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Las praderas marinas sostienen la vida bajo el agua 🌊

💨 Absorben CO2
🌬️ Liberan oxígeno
🐠 Refugian y alimentan la biodiversidad marina

El #DíaDeLasPraderasMarinas pone el foco en su conservación y recuperación. Protegerlas es cuidar el océano 💙

#WorldSeagrassDay

1 month ago 10 6 0 0
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Best practices for moving from correlation to causation in ecological research - Nature Communications Different scientific traditions offer seemingly disparate approaches to inferring causal relationships in ecological systems. This Perspective unifies the causal assumptions and methods from...

Excited to share our new paper in @natcomms.nature.com We synthesize causal discovery & inference approaches across traditions (regression adjustment, quasi-expts, SEMs, Granger causality, convergent cross-mapping, and more) into a unified workflow for ecologists. www.nature.com/articles/s41...

1 month ago 165 64 3 6
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Impact of climate change mitigation strategies in rice farming on agroecosystem multifunctionality These results suggest that, from a landscape management perspective, implementing a single irrigation strategy at large spatial scales should be discouraged due to potential negative effects on parti....

📢📝 New paper out in @jappliedecology.bsky.social !!!

Impact of climate change mitigation strategies in rice farming on agroecosystem multifunctionality
Assessment of 20 indicators related to Biodiversity, Ecosystem services and Rice production.
besjournals.onlinelibrary.wiley.com/doi/10.1111/...

1 month ago 7 5 0 0
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Built a “3D” sphere (SVG) to show RYB transformations.
Over-iterated in @codepen.io

10% optimization, 90% procrastination.

codepen.io/meodai/full/...

2 months ago 1381 219 19 7
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‘The Ecology of Ecologists’: what, if anything, is ecology? (book review) What, if anything, is ecology? You would think I’d know that – I’ve been a practicing (academic) ecologist for about 40 years. But I don’t. Sure, I know some stuff. I know that ecology isn’t the sa…

Jeremy Fox has a new book out, 'The Ecology of Ecologists'. What's that about, and should you read it? (Quick answers: how ecology's chaos of approaches is a feature, not a bug; and YES.) scientistseessquirre... 🌍🧪

2 months ago 27 9 1 0
Bombus pascuorum pollinating Teucrium pyrenaicum in Gorbeia Natural Park

Bombus pascuorum pollinating Teucrium pyrenaicum in Gorbeia Natural Park

Three technicians sampling in Gorbeia Natural Park

Three technicians sampling in Gorbeia Natural Park

Kaixo BlueSky! 👋 We are SARE Lab [Sare means network in Basque, reflecting our focus on the intricate connections within nature]. Learn more about our team and research here: gorbeea.bc3research.org

2 months ago 8 2 0 0

That's a very good question, Benjamin. Let me discuss this with Mengjiao and we'll get back to you!

2 months ago 1 0 1 0

Ecosystem stability is about local diversity! 🌏🌱

Really happy to see our new paper out in @natcomms.nature.com.

Thanks to @huangmj.bsky.social for beautifully leading this project and to coauthors @danimontoya.bsky.social, Yao Xiao, Xiang Liu & Yann Hautier for this great collective effort.

2 months ago 15 3 1 0
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Pharmacophagy in insects: Ecological and evolutionary perspectives on the non‐nutritional use of plant specialized metabolites Insects interact with plants not only for nutrition but also to actively seek plant specialized metabolites (PSMs) for chemical defense, reproduction, and self-medication—a behavior known as pharmaco...

Did you know? Insects eat plants as medicine. #OpenAccess
onlinelibrary.wiley.com/doi/10.1111/...

2 months ago 57 29 0 4

Paper alert! Our study about functional motifs is out in PNAS. We use food webs as an example to discuss how small subgraphs drive the dynamics in complex systems. While motifs that determine overall stability are rare, when it comes to reactivity, we show that small groups dominate system behavior.

2 months ago 15 5 0 0
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Unlocking a tiny plant’s big potential for research and biotechnology Duckweed grows fast and is easy to cultivate, but until now has been difficult to modify genetically. A new, reproducible transformation toolkit for these plants opens the door to the wider use of…

'This should make duckweed an attractive and accessible research model to a wider circle of scientists.'

@gmivienna.bsky.social scientists create new, reproducible transformation toolkit for duckweed:

www.oeaw.ac.at/gmi/detail/n...

🧵1/2 #PlantScience

2 months ago 5 2 1 0
A photo of a computer monitor with the title page of a book, entitled 'the world beneath our feet' by Frank Ashwood. In front of the monitor is my hand, holding a mug with images of many hard-bodied oribatid mites on it.

A photo of a computer monitor with the title page of a book, entitled 'the world beneath our feet' by Frank Ashwood. In front of the monitor is my hand, holding a mug with images of many hard-bodied oribatid mites on it.

Today is my final day of book writing, then it's off for copyediting and out of my hands!

It's been a true labour of love, and I'm feeling bittersweet. How better to cross the finish line than with coffee in this mite-y good mug by @fminifera.bsky.social

#SoilBiodiversity #TheWorldBeneathOurFeet 🧪

2 months ago 41 7 5 0
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Warmer environments harbor greater thermal trait diversity in moth assemblages - Nature Communications Climate limits where insects can live and which species can coexist. Using thermal tolerances of 653 moths on Asian mountains, this study shows warmer temperatures broaden thermal tolerance traits div...

How do temperature regimes shape trait diversity in communities? Does variability promote more specialists or more generalists?

Our new Nature Communications paper tackles this with eco-evo simulations + 653 moth species across latitudinal and elevational gradients.
www.nature.com/articles/s41...

2 months ago 8 5 0 0
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Happy to share that our new paper is out!
We quantify multiple ecosystem services in rangelands with standardized global data from #NutNet 🦌🐄🦬, and show how their synergies and trade-offs shift with grazing exclusion and fertilization 🌿🌏💫
doi.org/10.1002/fee....
@esajournals.bsky.social

2 months ago 16 5 2 1

All my #rstats ebooks are now in the quarto format, and hosted on Quarto Pub. Their old bookdown links will all be dead by the weekend.

1/3

2 months ago 88 24 6 1