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Posts by Mark Hibbins, Great Lakes Swashbuckler

Hibbins Lab

I'm hiring a postdoc (start date flexible) and a PhD student (for Fall 2027) to work in any area of computational phylogenetics! More info here:

mhibbins.github.io

I will be attending both PEQG and Evolution in June, so please reach out if you want to chat at these meetings!

3 days ago 39 47 1 1

Developing a course is all about realizing how much stuff you take for granted / understand intuitively in your subfield that you didn't even realize you needed to explain

5 days ago 7 1 0 0

Factory resetting your computer these days means having to turn off like 10 different AI assistants every time you install something

1 week ago 1 0 0 0

Olivia was in the middle of her rotation project in my lab and we had to scramble to put a proposal together because of the rule changes this year. She wrote a great proposal in a relatively short span of time. Super proud!!

1 week ago 4 0 0 0

Huge congrats to my first PhD student Olivia Frary who was awarded an NSF GRFP!!!

1 week ago 42 2 1 2

Capitalism certainly has its flaws but one thing I do appreciate is the tremendous diversity of hot sauces it produces, which help keep me sane when I am trying to lose weight ๐Ÿ˜…

1 week ago 3 0 0 0
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Structure and sequence evolution in the pennycress (Thlaspi arvense) pangenome Eukaryotic genomes harbor many forms of variation, including nucleotide diversity and structural polymorphisms, which experience natural selection and contribute to genome evolution and biodiversity...

Out now in @newphyt.bsky.social with @joannarifkin.bsky.social, @jotlovell.bsky.social, @spicybotrytis.bsky.social & more! Our high-quality pennycress pangenome is a striking example of genome architecture shaping different kinds of genomic variation, including some surprising centromeric movement

2 weeks ago 34 17 2 2

For anyone curious, I went with Cowen's History of Life 6th edition. Kinda pumped to read it. Will report back ๐Ÿซก

2 weeks ago 2 0 1 0

coke zero is one of life's great joys

3 weeks ago 2 0 0 0
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Okay hold up. We could be seeing a manned Moon mission in the next couple of weeks? Why am I just hearing about this now?!?!?!?

3 weeks ago 0 0 0 0

Can anyone recommend a good, modern textbook on the history and diversity of life on Earth? Something that covers major evolutionary innovations, systematics and the tree of life, key radiations and extinction events, etc. Ideally upper undergrad level. For course development!

4 weeks ago 3 0 5 1
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POV you are writing a paper about plant sex chromosome evolution

1 month ago 37 6 1 0

"Weekends are sacred no work allowed" vs. "I often do my best writing on Sunday afternoon in a cafe"

1 month ago 0 1 0 0

Every year daylight savings provides fascinating insights into how much biological clocks rule over my daily activities

1 month ago 5 0 0 0

remember when the boat got stuck

1 month ago 3 0 0 0

THE weirdest

1 month ago 1 0 0 0
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Training until failure but it's your brain's ability to write words

2 months ago 0 0 1 0

Is the EM algorithm machine learning

2 months ago 2 0 0 0

Word is such an annoying piece of software but I am so glad they integrated LaTeX into its equation editor

2 months ago 1 0 0 0

sitting back, relaxing, and filling in my first annual activity report

2 months ago 0 1 0 0

I generally just contact their references to chat rather than asking for formal letters

2 months ago 2 0 0 0
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SLiM 5: Eco-evolutionary Simulations Across Multiple Chromosomes and Full Genomes Abstract. Evolutionary simulations of multiple chromosomes, even up to the scale of full-genome simulations, are becoming increasingly important in populat

Slim 5 can now simulate genomes with multiple chromosomes like autosomes, sex chromosomes, mitochondria and chloroplast dna academic.oup.com/mbe/article/...

2 months ago 93 34 0 0

TIL that in linguistics they have their own version of ancestral state reconstruction for languages that they also call the comparative method. Fun!

2 months ago 1 0 0 0
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Has somebody tried telling the government that when people die they can't spend their money at businesses

3 months ago 2 0 0 0
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Going from Rochester winter to Baton Rouge winter

3 months ago 0 0 0 0
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Rapid evolution of synteny associated with multiple origins of dioecy and XY sex determination Chromosomal rearrangements are a major driver of evolutionary innovation, shaping processes including local adaptation, speciation, and sex chromosome evolution. Multispecies synteny datasets are rich...

Very excited to share the capstone of my postdoc work with @stepheniwright.bsky.social, co-led by Wright lab grad student Cassandre with contributions from many others.

We combined new methods with high-quality Rumex assemblies to dive into the remarkable history of rearrangement in this genus.

3 months ago 32 12 0 1

Surely this is not the same amygdala my ancestors were using to fend off wolf packs and grizzly bears

4 months ago 2 1 0 0

There is a lot of stuff going on. I feel it would be nice if there wasn't as much stuff going on

5 months ago 4 0 0 0
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When you look at your old code and you're impressed that past you was able to figure all that out

5 months ago 32 1 1 0

So far my experience of winter in Rochester is that it's basically a coin flip whether you're going to get pelted on the face with hail on your commute home from work

5 months ago 2 0 0 0