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Posts by Jigyasa Nigam

BioEmu now published in @science.org !!

What is BioEmu? Check out this video:
youtu.be/LStKhWcL0VE?...

9 months ago 91 28 6 4
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As a bonus - it also works in the condensed phase, and there's a #recipe for this atomistic-cookbook.org/examples/per... 😋

1 year ago 2 1 1 0
A schematic of the functioning of a ML/QM hybrid framework

A schematic of the functioning of a ML/QM hybrid framework

When you combine #machinelearning and #compchem, you need to start worrying at the QM details within your ML architecture. We use our indirect Hamiltonian framework and pySCFAD to explore the enormous design space arxiv.org/abs/2504.01187

1 year ago 14 4 2 0
GitHub - microsoft/bioemu-benchmarks: Benchmarking code accompanying the release of `bioemu` Benchmarking code accompanying the release of `bioemu` - microsoft/bioemu-benchmarks

Today we have published BioEmu-Benchmarks (MIT license): a code to evaluate the multi-conformation sampling benchmarks, MD free energy landscape benchmarks, and folding free energy benchmarks shown in the BioEmu-1 paper with BioEmu or your own model. Some details below 🧵

github.com/microsoft/bi...

1 year ago 76 21 4 0
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So great to be back home at #EPFL for AMLD @appliedmldays.bsky.social ‬earlier this week, missing @micheleceriotti.bsky.social! Also was an opportunity to get up to mischief and catch up on some science with the @labcosmo.bsky.social gang!

1 year ago 7 0 0 0
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Super excited to preprint our work on developing a Biomolecular Emulator (BioEmu): Scalable emulation of protein equilibrium ensembles with generative deep learning from @msftresearch.bsky.social ch AI for Science.

www.biorxiv.org/content/10.1...

1 year ago 441 147 21 29