Title card for podcast episode with J. Eric Oliver.
Mindscape 350 | J. Eric Oliver @ericoliver.bsky.social on the Self and How to Know It. #MindscapePodcast
www.preposterousuniverse.com/podcast/2026...
Title card for podcast episode with J. Eric Oliver.
Mindscape 350 | J. Eric Oliver @ericoliver.bsky.social on the Self and How to Know It. #MindscapePodcast
www.preposterousuniverse.com/podcast/2026...
Ooooh, I completely forgot about this song. Thanks for sharing!
So sorry to see that :( ๐ซ
๐ฃ๐๐๐ฒ ๐บ๐บ๐๐๐ ๐ฉ๐ฎ๐น๐ถ๐ฑ๐ฎ๐๐ผ๐ฟ: validate your mmCIF files against PDBx/mmCIF dictionary
โ
Real-time check
โ
Metadata completeness indicator
pip install pdbe-mmcif-validator
install VS code extension: marketplace.visualstudio.com/items?itemNa...
GitHub - PDBeurope/mmcif-validator: github.com/PDBeurope/mm...
NEW VIDEO
youtu.be/uiGIbdrQjbI?...
The AlphaFold Database, jointly developed with Google DeepMind, now contains datasets from specialist communities.
This includes rich datasets for microbes, viruses & parasites associated with tropical diseases.
Explore the new datasets in the AlphaFold Database.
www.ebi.ac.uk/about/news/u...
Title card for Mindscape podcast episode with Rachell Powell.
Mindscape 342 | Rachell Powell on Evolutionary Convergence, Mind, and Morality. Do social structures, like eyes and fins, arise independently from evolutionary pressures? #MindscapePodcast
www.preposterousuniverse.com/podcast/2026...
Title card for podcast episode with Stewart Brand.
Mindscape 341 | Stewart Brand on Maintenance as an Organizing Principle. Yes, Zen and the Art of Motorcycle Maintenance comes up. #MindscapePodcast
www.preposterousuniverse.com/podcast/2026...
It also interferes with muscle memory. The more junk I see, the harder it is to avoid second-guessing myself.
๐จOur first talk this new year would be a joint theory/experiment talk by Prof. Marino Arroyo and Prof. Xavier Trepat @xaviertrepat.bsky.social describing some of their recent work together on active morphogenesis๐งซ. Sign up to our mailing list for a zoom link to this talk and other upcoming talks๐จ
Stunning 4K Drone Footage Over Icelandโs Mystical Landscapes and Seascapes laughingsquid.com/iceland-4k-d...
This event was amazing! Thank you for organising it @tlmcambridge.bsky.social!
FOSDEM 2026 added a developer room for Bioinformatics and Computational Biology: fosdem-bioinformatics.github.io/cfp.html ๐งฌ
End-to-end protein design in the browser through evedesign. Generate and interactively explore designs in 2D/3D and export them as codon-optimized DNA. The underlying open source framework (released soon) is build to easily add new methods, more on that soon.
๐ evedesign.bio
Very cool! Sounds like we're getting critical mass in Europe @hazelweakly.me :)
So nice to see you're still working on this project. Thank you for all the amazing work! โค๏ธ
ripgrep 15 is out! Mostly a host of bug fixes, particularly around gitignore. Some minor perf improvements. A couple small features. And (partial) Jujutsu support for gitignore.
github.com/BurntSushi/r...
My project coordinator, Jennifer Fleming, did a detailed podcast on AlphaFold: www.linkedin.com/posts/artifi...
Very insightful research into social networks
Title card for Mindscape Podcast episode on Fine-Tuning, God, and the Multiverse.
Mindscape 331 | Solo: Fine-Tuning, God, and the Multiverse. In which I shamelessly steal material from the #PhilosophyOfCosmology course I am teaching to talk about some big questions. #MindscapePodcast
www.preposterousuniverse.com/podcast/2025...
Hope they step on dog poo
If one is so fortunate
as to find a place in the world.
And another soul with whom
one's loneliness can reside.
2/2
Maybe a bit cheesy, but I really liked this dialogue from a movie called Mr Holmes:
It's us, on this side,
who are, all of us so...
Alone?
I have been alone...
all my life.
But with the compensations
of the intellect.
- And is that enough?
- It can be.
1/2
Do you study proteins?
The new PDBe entry pages make it easier to explore protein structures.
๐ข Visualise ligands & macromolecules with improved 3D viewers
๐ข Get background info from AI-based annotations
๐ข Add your own annotations to viewers without leaving the browser
@pdbeurope.bsky.social
๐งฌ๐ฅ๏ธ
Making structural biology data accessible to everyone โ from specialists to first-time explorers.
โจ Discover the new interactive, personalised & mobile-ready PDBe Entry Pages.
๐ Read more: www.ebi.ac.uk/about/news/u...
๐ Try it: www.ebi.ac.uk/pdbe/entry/p...
Spot on and really well written!
Thanks for the visit Nobel laureate John Jumper & colleagues Kathryn Tunyasuvunakool and Lindsay Willmore from Google DeepMind.
Always interesting to hear and discuss #AlphaFold and protein structure predictions.
That Dio look: www.youtube.com/watch?v=2lvs...