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Posts by OpenSourceNeuro

Yesterday was #purpleday, the global epilepsy awareness day. Learn about mechanisms of seizure occurence in epilepsy with a 2-minutes Spikeling workshop ! #Neuroscience #Education #Epilepsy

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See how we explore neuronal logic with a quick Spikeling circuit workshop — Part 1. #LogicalGating

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Spikeling brings these core principles of neuronal computation, at the intersection of neurophysiology and computer science.

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At the intersection of neurophysiology and computer science, studying these mechanisms benefits from close collaboration between experimentalists and computational scientists. #Neurophysiology #ComputerScience

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Neural circuits combine inputs and gate signal propagation, shaping how information is transmitted and transformed. #NeuronalCircuits

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Neural computation emerges from physical processes in biological circuits.

#Neuroscience #ComputerScience #NeuronalCircuits

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We hope to integrate Spikeling workshops as a complement to electrophysiology lectures in neuroscience and biomedical sciences programs, to offer hands-on experience to the whole classroom, instead of just for a few students lucky enough to get an internship with wet-lab experience. #CalciumImaging

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Spikeling sparked lots of interest and discussions on how it modernise the way we teach electrophysiology for neuroscience and biomedical students.
#STEM #Education #Electrophysiology #Innovation

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Yesterday for
@opensourceneuro.com , Paul Rignanese was presenting a poster and a live demo of Spikeling at the Institute for Neuroscience and Cardiovascular Research Early Career Researcher Day at the The @edinburghuni.bsky.social !

#Neuroscience #BiomedicalSciences

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- Signal preprocessing, see how to handle different types of noise and cleanup your data before extracting spikes.

Stay tuned for advancements ! #Neuropixel

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See how your Spikeling neuron firing action potentials would look like in a extracellular ephys setup live. Features :

- Spatial integration, see how the electrode placement relative to the neuron impacts the extracellular field recordings, determining for spike sorting. #Ephys

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Spikeling v3 feature reveal : a new module ! After current clamp, voltage clamp, calcium imaging, we are implementing an extracellular tetrode recording module ! #Neuroscience #CalciumImaging

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This workshop is meant to act as a facillitator to fuel collaboration between behavioural and neuronal research, an essential aspect of neuroscience.

Thanks to everyone involved ! #CalciumImaging #Neuroscience

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Spikeling allows people from outside the field of Neurophysiology to grasp essential concepts such as membrane voltage dynamics, synaptic integration, patching electrophysiology, calcium imaging, and have a better understanding to relate with the electrophysiology team.

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Today with the Kind Lab affiliated with the Simons Initiative for the Developping Brain @sidb-edinburgh.bsky.social at the University of Edinburgh @cmvm-edinburghuni.bsky.social, we ran a Spikeling workshop with the ethology team within the lab.
#Electrophysiology

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Interplay of behaviour and neurophysiology is at the core of neuroscience, and collaboration of ethologists and neurophysiologists is crutial. #Ethology #Neurophysiology

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A simple floor map (hand → spinal cord → brain) and real-time spike activity the young students could see and even hear.

A practical way to show what neurons do and what neurophysiology researchers measure.

#NeuroscienceEducation #Neurophysiology #TReNDinAfrica

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Last summer in Ghana, during a @TReNDinAfrica outreach event in the exchange program between the VIB-KU Center For Neuroscience @vibneuroleuven.bsky.social and the University of Ghana, we used Spikeling to show pain propagation mechanisms to kids -

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OSN promotes neuroscience access with open, low-cost tools for education, training, and outreach, especially where conventional neurophysiology setups aren’t available.

#ScienceOutreach #OpenScience

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This supports state-of-the-art teaching goals: quantitative, reproducible, experiment-driven training without requiring access to expensive wet-lab infrastructure. #Neurophysiology #Electrophysiology

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Students can test how sampling, kinetics, saturation, noise, and bleaching shape what imaging “means,” then export traces for standard analyses and spike inference. #TwoPhotonImaging

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Spikeling’s imaging simulation brings microscopy-grade data interpretation into the classroom by linking Vm/spikes to Ca²⁺ and fluorescence (F ; ΔF/F) in real time.

#Neuroscience #CalciumImaging

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Contact us to implement Spikeling practicals at your university !
#Neurophysiology #TwoPhoton
#ComputationalNeuroscience #OpenScience #OpenHardware

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Spikeling also links ephys “ground truth” (spikes/Vm) to modern imaging:

its two-photon simulation generates a fluorescence/calcium-style readout, helping students interpret 2-photon data and analysis choices when working with open resources (e.g. @Allen Institute datasets).

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- but have never had the opportunity to observe or record neuronal responses in an experimental setting.

Spikeling changes that.

Around laptops and devices, students run electrophysiology-style protocols: shaping inputs, tuning frequency/intensity and see firing dynamics evolve in real time.

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State-of-the-art neuroscience education shouldn’t depend on access to patch-clamp rigs or two-photon microscopes.

At the @trendcamina.bsky.social computational neuroscience & ML workshop feat. @akoumoundourou.bsky.social, students arrive with strong coding skills -

#NeuroscienceEducation #CAMINA

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See how we can approach the mechanisms of seizure occurence in epilepsy with a 2-minutes Spikeling workshop ! #Epilepsy #Seizure #Neuroscience #Electrophysiology #Neurophysiology

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POV : unboxing a Spikeling delivery from @opensourceneuro.com ! #Neuroscience #Education #STEM #Electrophysiology #Neurophysiology #Opensource #Spikes

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Finish like a real practical: built-in tools for stimulus alignment, spike detection, and averaging—a complete experiment from stimulus to analysis, in the classroom. #Education #STEM

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Flip the input polarity to teach ON vs OFF pathways (responses to light onset vs offset), then tune decay and recovery to demonstrate adaptation and sensitivity reset. #NeuroPhysiology #ElectroPhysiology #Teaching

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