Congratulations to the winners of the @arcinstitute.org Virtual Cell Challenge using 10x Genomics GEM-X Flex technology. Ready to build your own? http://virtualcellchallenge.org/

#VirtualCellChallenge #AI

Why Climate Action Is Unstoppable — and “Climate Realism” Is a Myth | Al Gore | TED YouTube video by TED

Great to see Al Gore back on the stage on this impactful TED talk on climate action. youtu.be/Ztx0Bch3h9s?...

Essay | What Does MAGA Have Against Europe? You’ve heard about anti-Americanism. Welcome to anti-Europeanism.

“When they say ‘Europe,’ they mean liberal Europe,” says Kagan. He notes that Trump and his top aides have no problem with European nativists such as Hungarian leader Viktor Orban or the far-right Alternative for Germany party (AfD). www.wsj.com/politics/wha...

Oops.

Buy the original in Latin, because caesaribus is not common

Looks interesting.

Cell2fate infers RNA velocity modules to improve cell fate prediction - Nature Methods Cell2fate improves RNA velocity analysis of single-cell and spatial transcriptomics data by module decomposition of realistic biophysical models of transcription dynamics.

Want to map the origins and trajectories of cells in development and disease? Cell2Fate is here to help you! 🚀

🔗 Learn more: doi.org/10.1038/s415...
🖥️ Try it on your own datasets: github.com/BayraktarLab/cell2fate

Release notes Version 1.11: 1.11.0 2025-02-14: Release candidates: rc2 2025-01-24, rc1 2024-12-20. Features: rc1 sample() supports both upsampling and downsampling of observations and variables. subsample() is n...

🎉 Scanpy 1.11.0 is out! 🎉 just after reaching 2000 stars on GitHub!

- sc.pp.sample replaces subsample with many new features
- Sparse Dask support pca
- session-info2 package for more reproducible notebooks

See the release notes:

Dear americans: wtf?

ResolVI - addressing noise and bias in spatial transcriptomics www.biorxiv.org/content/10....

Closing 2024, scverse celebrates growth and collaboration! Huge thanks to everyone on this journey and our core team & board (@fabiantheis.bsky.social, @francescafinotello.bsky.social, @steglelab.bsky.social, Nir Yosef, @panosroussos.bsky.social, @robp.bsky.social). Here's to an inspiring 2025!