Last month's Monthly AusBIAS webinar is now live on our youtube channel. Nic Condon from University of Queensland Institute for Molecular Bioscience presented "Big Data Infrastructure Strategies for Image Analysis in a Core Facility"
www.youtube.com/watch?v=zE0q...
We have published the results from our International Microscopy Facility Survey in the @jofmicroscopy.bsky.social.
onlinelibrary.wiley.com/doi/10.1111/...
@australianmms.bsky.social @ausbias.org @micro-au.bsky.social @globalbioimaging.bsky.social @royalmicrosoc.bsky.social
Screenshot of my youtube followers. DOUBLE DIGITS! WE'RE ON OUR WAY!
Not to brag, but I'm kind of a big deal
You asked (well a couple of you) and I listened! AusBIAS monthly meeting presentations will now be available on YouTube! (with speaker permission) First up is last month's presentation by Cam Nowell taking us on a whirlwind tour of projects that come across his desk.
www.youtube.com/watch?v=xaRu...
AusBIAS sticker on a glowing PC case
Haven't posted in a while. Since before I was at @globias.bsky.social conference in fact. But that did inspire me: AusBIAS got swag!
If you're heading to LMA2026, you should be able to hunt down your own AusBIAS sticker to help spread the word about image analysis in Australia!
A fluorescent embryo on black text, with the words Halfway to I2K: Virtual Tutorials on Image Analysis November 17-19, 2025 Virtual Conference for beginners to developers i2kconference.org Image Credit - "Sweet Embryo",Travis D. Carney, BINA Image Contest 2024
Just 4 days until the start of I2K and its 33 totally free image analysis tutorials and events! Please share with your "home networks", especially early career researchers - the videos will be amazing and high-impact no matter how many people attend live, BUT (1/x)
Kobe skyline at night
Day two of @globias.bsky.social symposium ended with a "call for help" session. It takes courage to speak at a conference telling your peers about what you know, it takes even more to ask for help with what you don't know. Great job from the presenters and great suggestions by the audience.
napari core team members coding with community members at the GloBIAS 2025 hackathon at RIKEN BDR in Kobe, Japan.
napari core team members and community members in a discussion at the GloBIAS 2025 hackathon at RIKEN BDR in Kobe, Japan.
napari core team members coding with community members at the GloBIAS 2025 hackathon at RIKEN BDR in Kobe, Japan.
napari core team members and community members posing together for a group photo on a staircase at the GloBIAS 2025 hackathon at RIKEN BDR in Kobe, Japan.
Longer wrap-up to come, but in the meantime: we had a fantastic and productive time at the napari hackathon at @globias.bsky.social 2025 conference! Thanks to all the participants and to the GloBIAS team for hosting us!
Poster session at globias2025 event.
#GloBIAS2025 is ongoing with amazing speaker lineups at Kobe city
Beautiful location, amazing food and warm bioimage analysis community. What wlse does one need? ๐
Thanks to @globias.bsky.social for this event
Day one of @globias.bsky.social symposium. Analysis and sake is a surprisingly good pairing.
New blog post! Before heading off to @globias.bsky.social we'd love to hear about how image analysis is performed and accessed by the microscopy community! Find info and link here: ausbias.org/blog/2025/10...
Halfway to I2K is BACK, friends of all kinds! Last year, 650 people attended 30+ TOTALLY FREE image analysis workshops of all kinds, across many timezones.
If you make image analysis software and want to teach it, workshop submissions are open now! We'd love to have your tool highlighted.
One of the great things about HPC is the ability to fail at so many more things at once.
Trying to fill out the calendar for AusBIAS monthly online meetings. 3 or 4 spots left that will go to members first if requested, but if you're an internationally based image analyst and would like an invite - let me know! Just be aware of time zones, +10GMT isn't great for everyone!
Saving this video to show to anyone who asks "What is it you do?"
Lots of food for thought washed down with a cold pint after todays train the trainers 2025 CRICK Partnership & DAIM workshop #trainthetrainerBIA2025 @crick.ac.uk @ucl.ac.uk @imperialcollegeldn.bsky.social @martinjones.bsky.social @lankylaste.bsky.social @giuliapaci.bsky.social @dgaboriau.bsky.social
screenshot of the napari github repo page. The issues tab shows 999 open issues.
Ok guys **nobody open any more issues** ๐
We are proudly hosting
๐๐ซ. ๐๐๐ฅ๐ฅ๐๐ฒ ๐๐๐ฆ๐๐๐ซ๐ญ @talley.codes (CITE, Harvard Medical School):
๐๐ข๐ฆ๐ฎ๐ฅ๐๐ญ๐ข๐ง๐ ๐ซ๐๐๐ฅ๐ข๐ฌ๐ญ๐ข๐ ๐ฅ๐ข๐ ๐ก๐ญ ๐ฆ๐ข๐๐ซ๐จ๐ฌ๐๐จ๐ฉ๐ฒ ๐ข๐ฆ๐๐ ๐๐ฌ ๐ฎ๐ฌ๐ข๐ง๐ ๐ฆ๐ข๐๐ซ๐จ๐ฌ๐ข๐ฆ
When: ๐๐๐ฒ ๐๐๐ญ๐ก @ ๐๐ ๐๐ฆ ๐๐๐ (Boston time)
Join us on Zoom! harvard.zoom.us/j/9762343464...
#GloBIAS has a blog series - new post out today!
Two GloBIAS volunteers reflect on the first version of GloBIAS Free Help (previously Call4Help), explain the idea behind this activity and what was learned during the pilot session.
Please check out the webpage: www.globias.org/resources/gl...
New Post Alert! In our first meeting of 2025 @pammer61.bsky.social presented the wonderful perspective article of @bethcimini.bsky.social etal: "The crucial role of bioimage analysts in scientific research and publication" - Preaching to the choir, but with good cause!
Check it out at ausbias.org.
GloBIAS #BioimageAnalysis #Conference 2025 โ we have opened the registration for our 2025 in-person event. Please check the webpage www.globias.org/activities/b... for more information and the link to the registration form.
Always a great meeting!
๐จAlรด #bsky and #microscopy community, we got #ReScale4DL, our new work in
@aiopticalbiolab.bsky.social
, out today!๐ ๐ฅณ
We present the #imageresolutionparadox phenomenon for #DL-results ๐ค
๐Check it out!!
If you train people in ImageJ, Fiji, whatever, even if it isn't your day job, please let us know, and please share this post! Thanks a ton, we really appreciate it. (2/2) forms.gle/C8dUpg8qZkbD... #bioimaging #microscopy #bioimageanalysis
Got a bit carried away and registered a domain for our society. Turns out I can then use that domain as a bsky handle.
๐ Happening now! Join us for the #EuroBioImaging Image Data Community Days. Featuring workshops, talks, and interactive discussions, this online event is for anyone interested in image data & it's FREE and open to all. Starting now!
#ImagingCommunity
Register๐ฝ
www.eurobioimaging.eu/our-events/i...
Preprint (update) alert!
F-BIAS: Towards a distributed national core facility for Bioimage Analysis. (arxiv.org/abs/2409.15009)
0/ In this paper we discuss our experience in federating ourselves and delivering bioimage analysis services to the scientific community in France.
๐ a short thread
All I wanted to do was add the bsky logo to the footer of our new website. Down the rabbit hole I went and now have a fully custom Jekyll site with manual theme control and custom GitHub Actions deployment.
If you want to read the story of our logo, check it out:
ausbias.github.io/blog/2025/03...
The #gitbob paper has been published in @natcomputsci.bsky.social.๐ฅณ
Learn about the path "Towards transparency and knowledge exchange in AI-assisted data analysis code generation" facilitating how humans and AI can work together to solve #dataanalysis tasks. ๐ฝ๐งโ๐๐ฅ๏ธ๐๏ธ
rdcu.be/efkna
Only five days remain to register!*
Here is the tentative program:
*: it is likely that there won't be a deadline extension.