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Posts by Shruthi Viswanath

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Introducing AF-Pipeline, open-source Python package for extracting confident structures, interfaces from AlphaFold predictions isblab.github.io/af_pipeline/...
GitHub: github.com/isblab/af_pi.... By @omkargolatkar.bsky.social, initial idea @kartikmajila.bsky.social, test help @muskaanjl.bsky.social.

4 days ago 4 2 0 0
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#CallForApplications
We will soon be accepting applications for the interdisciplinary Physics of Life graduate program at NCBS/ICTS.

Eligibility: Students from Mathematics, Physics, Chemistry, and Engineering from GATE, JAM, JEST streams for 2026

๐ŸŒ: pol.ncbs.res.in

3 weeks ago 2 1 0 0

Excited to share our new COSB article on Integrative Modeling with AlphaFold authors.elsevier.com/a/1ml64,LqAr... by
@KartikMajila
@Omkar_Golatkar_
. Thanks to @NCBS_Bangalore for funding!

1 month ago 2 1 0 1
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โ€œModel Building, Refinement & Validation of Cryo-EM Dataโ€ workshop coming up soon! Organized jointly by NCBS-CCPEM-IISc

1 month ago 2 0 0 0
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Recent Methods from Statistical Inference for Integrative Structural Modeling Integrative modeling of macromolecular assemblies allows for structural characterization of large assemblies that are recalcitrant to direct experimental observation. A Bayesian inference approach fac...

Excited to share our book chapter on method development advances in integrative structural modeling in Springer Handbooks now online! @shreyasarvindekar.bsky.social @kartikmajila.bsky.social doi.org/10.1007/978-...

3 months ago 5 3 1 0
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A New Discrete-Geometry Approach for Integrative Docking of Proteins Using Chemical Cross-Links The structures of protein complexes allow us to understand and modulate the biological functions of the proteins. Integrative docking is a computational method to obtain the structures of a protein co...

๐Ÿ“ฃ#LatestPublicationAlert
@shruthilab.bsky.social and team developed a new discrete geometry-based method, wall-EASAL, for integrative rigid docking of protein pairs.

Congratulations to the team๐ŸŽ‰
@muskaanjl.bsky.social @pubs.acs.org
@tifr.res.in
pubs.acs.org/doi/10.1021/...
#computationalbiology

11 months ago 5 3 0 0
Frontiers in integrative structural modeling of macromolecular assemblies | QRB Discovery | Cambridge Core Frontiers in integrative structural modeling of macromolecular assemblies - Volume 6

Excited to share our lab's perspective on frontiers in integrative structural modeling out in QRB Discovery this week! By @kartikmajila.bsky.social and @shreyasarvindekar.bsky.social www.cambridge.org/core/journal...

1 year ago 8 5 0 0
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Two PhD or Postdoc positions in computational off-target analysis of siRNA and small peptides

Please forward to good candidates jobportal.ku.dk/videnskabeli...

1 year ago 13 9 1 0
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We are excited to share our preprint on identifying binding sites for IDRs from sequence. Do check out our method, Disobind (github.com/isblab/disobind).
@kartikmajila.bsky.social's PhD work!
www.biorxiv.org/content/10.1...

1 year ago 9 3 0 0
One PhD thesis in integrative structural biology | Research - Institut Pasteur

Do you want to work at the interface of molecular simulations, structural biology experiments and #AI? Come to Paris for a PhD at @pasteur.fr 1 PhD position is available in our lab funded by ERC_Research. Please repost!! #compchem #compbio Info ๐Ÿ‘‡ research.pasteur.fr/b/15Hr

1 year ago 53 40 1 1