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Posts by Mouse Genome Informatics

GXD Expression Profile Search is redesigned and enhanced to make it more versatile, improve its search speed, and include access to RNA-seq data. Read more: www.informatics.jax.org/mgihome/news....

1 year ago 1 2 0 0
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The Gene Expression Database (GXD) What kind of data does this resource provide ? The Gene Expression Database (GXD) is a community resource for gene expression information from the laboratory mouse. GXD stores and integrates different...

The Gene Expression Database (GXD) is featured this week by the Global Biodata Coalition:
bit.ly/4g4Z5cz

1 year ago 4 2 0 0
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Featured Resource: Gene Expression Database (GXD) - the Node Find out more about the Gene Expression Database (GXD), a community resource that collects and integrates mouse gene expression data generated by biomedical researchers worldwide.

The Node, the community site for and by developmental biologists, has a blog post featuring the Gene Expression Database (GXD): thenode.biologists.com/featured-res...

1 year ago 6 5 0 0
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Alliance Of Genome Resources Event Registration

The second Alliance webinar will be Thursday Oct 17, 2024. Noon EDT:
Introduction to Alliance APIs, presented by Chris Tabone with co-host Chris Grove.
This webinar will discuss the various Alliance APIs available for public use.
Preregister by Oct 16 to get the Zoom link: forms.gle/GzMnmwK23SzP...

1 year ago 1 3 1 0
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Alliance Of Genome Resources The Alliance of Genome Resources is a consortium of 7 model organism databases (MODs) and the Gene Ontology (GO) Consortium whose goal is to provide an integrated view of their data to all biologists,...

A recording of the first Alliance webinar "An Introduction to the Alliance" is now available on our YouTube channel: www.youtube.com/@AllianceOfG...
Also, we have a new YouTube channel.

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Alliance of Genome Resources

The Alliance of Genome Resources will present the first of a series of webinars of approximately 30 minutes.
On September 19, 2024 Noon EDT, Carol Bult will present An Introduction to the Alliance. This will cover searching the Alliance, Gene pages, & Disease pages, and will include a Q & A session.

1 year ago 0 6 2 1
MGI Data and Statistical Reports

MGI has a new weekly report of Mouse Protein Coding Genes having one-to-one Orthology with Human Genes, the HOM_ProteinCoding.rpt: www.informatics.jax.org/downloads/re...

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Search Mouse SNPs Search for mouse SNPs by gene or genome region. Results include selected strains. Filter by function class.

MGI increased its SNP records 4-fold to over 66 million. These data include the Sanger MGP (v5) SNP set. Use our preeminent SNP Query (www.informatics.jax.org/snp ) to search for SNPs by gene symbols or chromosomal regions across 101 mouse strains.

1 year ago 0 1 0 0
Improving laboratory animal genetic reporting: LAG-R guidelines - Nature Communications Reproducibility is key to all fields of research, and in the case of animal research, this can be hampered by inconsistent reporting of animal genetics. Here the authors propose a reporting framework ...

The LAG-R framework (Laboratory Animal Genetic Reporting) has been published in Nature Communications (doi.org/10.1038/s414...). The LAG-R framework supports documentation of the genetic make-up of research animals, bolstering reproducibility.

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MGD 1.0 was released on the World Wide Web 30 years ago.
Read more: www.informatics.jax.org/mgihome/news...

1 year ago 1 0 0 0
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Calling data resource users: we need your feedback EMBL-EBI asks users to fill in a services survey to help shape the future of the open data resources managed by the institute

EMBL-EBI asks users to fill in a survey to help shape the future of the open data resources managed by the institute.
You can find the survey (and EMBL-EBI's statement) here:

www.ebi.ac.uk/about/news/a...

1 year ago 0 2 0 0
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Mouse Genome Informatics: an integrated knowledgebase system for the laboratory mouse Abstract. Mouse Genome Informatics (MGI) is a federation of expertly curated information resources designed to support experimental and computational inves

The journal Genetics published recent MGI updates:
Mouse Genome Informatics: an integrated knowledgebase system for the laboratory mouse.

Genetics. 2024 May 7;227(1):iyae031: academic.oup.com/genetics/art...

1 year ago 1 1 0 0