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Posts by Daan Noordermeer lab

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🔬IGMM (CNRS/ Univ Montpellier) is hiring Group Leaders in Innovative Biology. @cnrsbiologie.bsky.social @cnrs.fr @umontpellier.bsky.social
📅 1 May–15 June 2026
📩 search2026@igmm.cnrs.fr
📎Full information 👇
#LifeScience #MolecularBiology #Research #PI #CNRS

4 days ago 24 28 1 0

📣📣 Deadline approaching 📣📣 (Please re-post)

If you are thinking of starting (or moving) your lab, do not miss the opportunity to apply to join us at the
@i2bcparissaclay.bsky.social

Diversity of topics, interdisciplinary environment and excellent platform support! Recommended!

1 week ago 9 12 0 0

So admittedly: the extra coverage in nCATs comes at an immense loss of coverage…

1 week ago 2 0 0 0

For adaptive sampling the coverage is more like 20-50 fold (half a promethion cell; nCATS was on a single minion). With adaptive sampling we’re indeed targeting ~ 3% of the genome

1 week ago 3 0 1 0

We have used both nCATS and adaptive sampling. nCATS got us around 100-200x coverage over ~200 kb of the mouse genome. But we didn’t do multi-plex. Can’t you just leave the 5’ phospho step out?

1 week ago 4 0 1 0
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Spring has arrived on campus

2 weeks ago 9 0 0 0

Germ cells have their own versions of core transcription factors and fertility depends on them.
We're hiring a PhD student to figure out how! 📢
Fly genetics + proteomics + genomics. Fully funded.
Aarhus University 🇩🇰
Deadline May 1 👇

Please share with anyone who might be interested!

2 weeks ago 33 41 0 4

Delighted to see our work now published at the EMBO Journal! Check also this concomitant paper by the Bai and Mirny labs with an orthogonal approach that aligns well with our measurements www.nature.com/articles/s41... Great system to study how SMCs facilitate/regulate target search in chromatin!

4 weeks ago 25 15 1 0
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Join IGH as Group Leader - IGH The Institute of Human Genetics invites applications for a Principal Investigator position in its main research areas. Read more...

We are looking for a new group leader to join the IGH (Montpellier, France). I can’t wait to meet my future colleague! Apply :-) More infos here: igh.cnrs.fr/join-igh-as-...

1 month ago 46 60 0 1
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We;re hiring Junior Group Leaders! 🔬✨
We’re looking for researchers in immunology, chemical biology, AI in biology, or protein design to launch their own independent groups in our collaborative, international environment.

www.nki.nl/news-events/...

2 months ago 18 29 0 2

Congratulations Agnese! Happy to have you in the Paris area

1 month ago 1 0 1 0
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We are looking for outstanding scientists to develop ambitious research programs in molecular and cellular biology, with special interest in multidisciplinary projects and computational biology.More info: www.i2bc.paris-saclay.fr #MolecularBiology
#CellBiology #ComputationalBiology #TeamLeaders#I2BC

1 month ago 20 34 0 4
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We are excited to be recruiting into 3 Associate Professorship's in @oxfordbiochemistry.bsky.social. Come join us as a colleague and benefit from our vibrant and multidisciplinary environment. Reach out to me if you have any questions. Please repost! (tinyurl.com/48deybuu) (tinyurl.com/4pdvjaft).

1 month ago 107 125 1 4

Focus on interdisciplinary projects in structural, molecular, cellular and computational biology. Deadline is the 22nd of April. DM me if you want to get more info!

1 month ago 1 0 0 0
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🚨🚨🚨 My institute, the @i2bcparissaclay.bsky.social in beautiful Gif-sur-Yvette and part of @univparissaclay.bsky.social, is recruiting group leaders!
Announcement here:
www.i2bc.paris-saclay.fr/join-i2bc/te...
Open to early career scientist from anywhere or mid-career already in France. Please RB!

1 month ago 11 16 1 0

Happy to share scHiCAR, an ultra-high throughout (millions of cells), low cost (5 cents/cell including NGS), and trimodal platform for integrated single-cell level analysis of mRNA, open chromatin, and 5-kb resolution looping with ground-truth data the same individual cell.

2 months ago 78 33 0 6
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🧪🧬New preprint We present cryo-EM structures of reconstituted CTCF–nucleosome complexes, showing CTCF dimerization drives nucleosome oligomerization into defined higher-order assemblies. Disrupting CTCF–CTCF interfaces in mESCs reduces looping and impairs differentiation. tinyurl.com/CTCF-nucleos...

2 months ago 124 52 4 3
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🚨Preprint alert🚨 How does chromatin “architecture” form at CTCF sites? Our new preprint with @voslab.org and @andersshansen.bsky.social shows CTCF dimerization promotes nucleosome oligomerization on chromatin. tinyurl.com/CTCF-nucleos...

2 months ago 69 18 0 3
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Unique territorial and compartmental organization of chromosomes in the holocentric silkworm - The EMBO Journal Hallmarks of multicellular eukaryotic genome organization are chromosome territories, compartments, and loop-extrusion-mediated structures, including TADs. However, these have mainly been observed in ...

How do compartmentalization & loop extrusion organize eukaryotic genomes beyond classical model organisms?
Hi-C analysis of silkworm chromosomes by Drinnenberg, Muller, Mirny et al reveals new combination of these mechanisms, and a new, secluded “S” compartment
link.springer.com/article/10.1...

2 months ago 38 25 0 2

Thank you Max, I’ll transmit the message 😃

2 months ago 1 0 0 0

That looked like an excellent visit!

2 months ago 2 0 0 0

New paper from the Feil lab! congratulations🍾👏

Great thread below ⤵️

@agencerecherche.bsky.social @frm-officiel.bsky.social Thank you for your support

@cnrs.fr @cnrsbiologie.bsky.social @cnrsoccitanieest.bsky.social @umontpellier.bsky.social @biolum-montpellier.bsky.social
#epigenetics

2 months ago 5 3 0 0

This has been an exciting collab with (all non-BS): Yui Imaizumi in Robert Feil’s lab (@igmm-montpel.bsky.social ), Francois Charon and Benoit Moindrot from @i2bcparissaclay.bsky.social and Jean-Charles Cadoret (@ijmonod.bsky.social) and others. Thanks to @agencerecherche.bsky.social for funding.

2 months ago 3 2 0 0

How about 3D organization? Correlations emerge at larger scale, but our high-res allelic data has poor overlap, both for timing and for boundaries between repli domains and TADs. At imprinted domains, regulators that desynchronize replication timing also uncouple links with genome organization (4/n)

2 months ago 3 0 1 0
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(2) perturbing lncRNA expression on the early chromosome delays replication, but further away. Methylation and lncRNA expression thus provide means to locally override the intrinsic replication program (3/n)

2 months ago 3 0 1 0
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Imprinted domains can replicate asynchronously, making them excellent study objects. High-res allelic Capture Repli-seq reveals unexpected outcomes: (1) removal of DNA methylation from the tiny Imprinting Control Region on the late replicating chromosome advances replication over 100s of kbs (2/n)

2 months ago 4 0 1 0
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DNA methylation and lncRNA control asynchronous DNA replication at specific imprinted gene domains - Nature Communications It is not fully understood why genomic loci show asynchronous DNA replication. Here, the authors show that two imprinted gene domains replicate asynchronously between the parental chromosomes due to d...

🔔 New paper alert 🔔 www.nature.com/articles/s41...
Some regions in the genome replicate early and some late, but the why and how remain poorly understood. DNA replication and 3D genome organization appear linked, raising the question if one may regulate the other? (1/n)

2 months ago 31 15 3 1

Bravo Anne and colleagues!

3 months ago 1 0 0 0
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Fresh news on de novo genes! Happy to present our latest work published in Nature communications: www.nature.com/articles/s41...

Keywords not in specific order: intergenic ORFs, de novo genes, GC content, foldability, genetic code, ancestral sequence reconstruction and more :)

3 months ago 48 24 2 0