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We hope this dataset serves as a resource for dissecting and eventually targeting T cell dysfunction in cancer and chronic infection. Extremely grateful to everyone who contributed, including collaborators @santoshvardhana.bsky.social Klebanoff Lab, Abdel-Wahab lab, Ari Hakimi, and Jiankun Lyu lab

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Cysteine reactivity profiling together with functional follow up studies highlight signaling and stress pathways linked to this metabolic insufficiency, including MAPK/JNK, p53/DNA damage, ER stress, proteasome regulation, and other proteome-wide effects.

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These analyses reveal extensive metabolic rewiring and bioenergetic stress in chronically stimulated T cells, including dysfunction of de novo purine and pyrimidine synthesis.

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Here we present an integrated multi-omic characterization of human T cell dysfunction, combining cysteine-reactivity-based chemical proteomics with proteomic, transcriptomic, and metabolomic profiling to track how molecular programs evolve during chronic TCR stimulation.

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Chronic antigen stimulation progressively impairs T cell self-renewal and cytotoxicity, but the molecular basis of this transition is still poorly understood, especially at the post-translational level.

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Excited to share our new preprint: “A post-translational regulatory map of chronic antigen-driven human T cell dysfunction.”! www.biorxiv.org/content/10.6...

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We leverage this platform to study energy balance-dependent remodeling of secreted and ER-resident proteins. We hope this tool and the resulting datasets will be useful for the community for dissecting cell-specific contributions to systemic metabolic regulation.

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Excited to share our new preprint in collaboration with Paul Cohen's lab at Rockefeller University and Ken Loh's lab at Yale University! We introduce TurboID-TMT for cell type-specific proximity labeling to profile organ secretomes and ER-resident proteomes in vivo. www.biorxiv.org/content/10.6...

3 months ago 20 5 1 2
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Faculty recruitment - Our Scientists

We are hiring! www.rockefeller.edu/our-scientis...

8 months ago 1 0 0 0

Very excited to join #CZBiohubNY as part of the recent cohort of new investigators!

1 year ago 1 0 0 0
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Applications for the 2025 Bioorganic GRC are now live! Here is the link where you can check out the current line-up:

grc.org/bioorganic-c...

1 year ago 63 30 2 9
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Chemical tools to expand the ligandable proteome: Diversity-oriented synthesis-based photoreactive stereoprobes Many human proteins lack chemical probes and are even considered undruggable. Ogasawara et al. describe diversity-oriented synthesis-inspired photoreactive small molecules (photo-stereoprobes) and the...

Cool paper from Cravatt lab: Chemical tools to expand the ligandable proteome: Diversity-oriented synthesis-based photoreactive stereoprobes: www.cell.com/cell-chemica...

1 year ago 71 12 0 0

We further leverage advanced chemical proteomic workflows to explore more broadly the largely untapped potential for targeting of splicing with cysteine-reactive covalent electrophiles.

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Reposting here! Check out the final version of our manuscript now in @cellchembiol.bsky.social ! In this study, we investigate the mechanism of action of an immunosuppressive small-molecule electrophile, which targets a core splicing factor SF3B1! @rockefelleruniv.bsky.social

1 year ago 13 3 1 0

Hello, BlueSky! I'm excited to be here! Thank you, @carolynbertozzi.bsky.social for helping me with the move!

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