www.nature.com/articles/s41...

Individual longitudinal exposure data such as PM2.5 is hear. #exposomics.

UK launch metagenomic pathogen surveillance programme On Jan 30, 2025, the UK Health Security Agency (UKHSA) announced the launch of the metagenomics Surveillance Collaboration and Analysis Programme (mSCAPE)—the world’s first biosecurity surveillance sy...

Metagenomics getting scaled up.
www.thelancet.com/journals/lan...

Focusing a viral risk ranking tool on prediction | PNAS Preparing to rapidly respond to emerging infectious diseases is critical. SpillOver: Viral Risk Ranking is an open-source tool developed to assess ...

New Brief Report out in @pnas.org with Katherine Budeski: www.pnas.org/doi/10.1073/... Focusing a virus risk ranking tool on prediction -- highlighting the importance of training models for viral emergence only on data available before emergence has happened.

Our paper out in IJC - We looked host-virus methylation signals for cervical cancer among HPV vaccinated women, who developed cervical HSIL lesions post vaccination. Results suggest these high-grade lesions eventually are very likely not to lead into cancer. 10.1002/ijc.35044 #cancerprevention

HPV-KITE: sequence analysis software for rapid HPV genotype detection Abstract. Human papillomaviruses (HPVs) are among the most diverse viral families that infect humans. Fortunately, only a small number of closely related H

Latest manuscript with Marek Nowicki and colleagues out from Briefs. in Bioinformatics. A simple, fast and scalable method to detect target taxa from sequence data. @unioulu.bsky.social
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