Interested in Python programming and good software engineering practices? Check out my newest blog post where I introduce a "modern Python" GitHub repository template and talk about my motivation for its creation! mmzdouc.github.io/posts/2025/1...
PhD Position in Modelling Regulation of Plant Stress Responses across Species!! 🌱🌽🌾🥬🌡️🌡️
Apply before June 16 to join this exciting project with Kirsten ten Tusscher in the context of CropXR!! www.uu.nl/en/organisat...
Unsplash image of the Earth, mostly the nightside with a tracery of city lights on every continent.
OK, this is wild.
In September 2023, geophysicists across the world started monitoring a very odd signal coming from the ground under them.
It was picked up in the Arctic. And Antarctica. It was detected everywhere, every 90 seconds, as regular as a metronome, for *nine days*.
What the HELL?
1/
Tariffs xkcd.com/3073
Hahaha that's awesome! Let me know if you have any questions; always happy to chat!
Flowchart that shows how gene modules are found from co-expression data, connected using TFBS enrichment, and fitted to experimental data.
New preprint!
BADDADAN mechanistically models time-series response of >1000 genes to stress by clustering first, then fitting an ODE model.
Demonstrated on real Arabidopsis data: interpretable, coherent modules, plus new and existing biological insights.
doi.org/10.1101/2025.02.18.638670