Graph neural networks recover interpretable circuit models from neural activity
saalfeldlab.github.io/flyvis-gnn/
@HHMIJanelia
@AllenInstitute
to be presented at @CosyneMeeting

Graph neural networks uncover structure and functions underlying the activity of simulated neural assemblies
arxiv.org/abs/2602.13325
saalfeldlab.github.io/neural-gnn/
@hhmijanelia.bsky.social

Graph neural networks uncover structure and functions underlying the activity of simulated neural assemblies Graph neural networks trained to predict observable dynamics can be used to decompose the temporal activity of complex heterogeneous systems into simple, interpretable representations. Here we apply t...

This is work that we presented at last year's #Cosyne workshop on #GNN s sites.google.com/bu.edu/gnnwo.... Better late than never. You can reproduce everything with the associated notebooks. I think it's a good start to learn how to use GNNs to infer something about NNs. arxiv.org/abs/2602.13325

Graph neural networks uncover structure and functions underlying the activity of simulated neural assemblies
arxiv.org/abs/2602.13325
saalfeldlab.github.io/neural-gnn/
@hhmijanelia.bsky.social

github.com/allierc/Fluo-BPM
@hhmijanelia.bsky.social
Fluo + RI: differentiable beam propagation method

github.com/allierc/MPM_pytorch
@HHMIJanelia
pytorch version of github.com/taichi-dev/taichi

github.com/allierc/MPM_pytorch
@HHMIJanelia
pytorch version of github.com/taichi-dev/taichi

github.com/allierc/MPM_pytorch
@HHMIJanelia
pytorch version of github.com/taichi-dev/taichi

Join the team at Janelia to use #theory, computation, and modeling to tackle bold questions in #biology. Collaborate across scientific disciplines to drive discovery.

Apply by Nov. 3 @ https://janelia.link/theoryfellowprogram

#computationalbiology #sciencecareers

@hhmijanelia.bsky.social
C.Elegans neuron activity

you nailed it

✨ We’re #hiring Theory Fellows!✨

Janelia is recruiting early-career scientists to join our collaborative research environment and use #computation & #theory to tackle bold questions in #biology.

🔗 Apply by Nov. 3 👉 janelia.link/theoryfellow...
@hhmi.org

github.com/allierc/MPM_pytorch
@HHMIJanelia
pytorch version of github.com/yuanming-hu/...

github.com/allierc/MPM_pytorch
@HHMIJanelia
pytorch version of github.com/yuanming-hu/...