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Posts by neurodesk.org

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Masson-Trottier et al. demonstrate how Neurodesk improves the transparency, portability, and sustainability of neuroimaging workflows: doi.org/10.52294/001...

@neurodesk.org @sbollmann.bsky.social
#FutureofPublishing #SpecialIssue

7 months ago 6 4 0 0
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Fernanda Ribeiro kicking off OHBM in the educational session “Maximizing scientific efficiency through sustainability, reproducibility, and FAIRness” and showing how Neurodesk can help :)

9 months ago 8 0 0 0
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Day 3 of OHBM BrainHack going strong (this photo is from yesterday btw, repeat today anyone?) with HackTrack, TrainTrack, StatsWorkshop, and @neurodesk.org !

9 months ago 14 4 0 0

@neurodesk.org workshop at BrainHack #OHBM2025 is about to start 🙌🏽

10 months ago 4 1 1 0
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🧠 Join us at Brainhack 2025 in Brisbane!
We’re running a Neurodesk workshop on reproducible, portable neuroimaging workflows.
📅 21 June
🌐 Learn, hack, and contribute! 💻🌏
🔗 ohbm.github.io/hackathon202...

#Neurodesk #Brainhack2025 #Neuroimaging #OpenScience

10 months ago 13 6 1 3

One of the exciting news for this year OHBM BrainHack is that we are bringing together like-minded events and joining up forces! @neurodesk.org will be there on June 21 for the Workshop, as well as the the 22nd with 23rd with two Hacking projects!

10 months ago 4 3 0 0

🔁 Neurodesk helps you re-run old analyses — even years later — in exactly the same environment.
This is the power of portable reproducibility.
Try it out at our Brainhack workshop.
#Neuroimaging #Reproducibility #Brainhack2025
@neurodesk.org

10 months ago 5 2 0 0

“What if installing FSL or FreeSurfer didn’t take hours — or even minutes?”
Come find out how we’ve made neuroimaging tools portable, fast, and accessible for everyone at the Neurodesk workshop at Brainhack 2025.
#Neurodesk #Brainhack #OHBM2025

@neurodesk.org

10 months ago 8 3 0 0
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Preserve the Open Science Room at the Organization for Human Brain Mapping Annual Meeting Can you spare a minute to help this campaign?

Please sign the petition to keep the Open Science Room at OHBM: chng.it/Yd8jd8Dz6L

10 months ago 1 1 0 0
OHBM Hackathon 2025

🚨 BrainHack is BACK for #OHBM2025 🧠✨ In addition to the Hackathon, this year will feature two brand new workshops: how to use NeuroDesk; and how to use the latest neuroimaging statistics
📍The Precinct, Brisbane
📅June 21–23, 2025
Details in the link, sign up today!
ohbm.github.io/hackathon2025/

10 months ago 6 4 0 1
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Ready to take your #health and #medical #research to the next level? 🩺
Our suite of resources and tools includes:
💡 Training and educational materials
📊 Datasets
🔧 Tools: like @neurodesk.org & ARDC Nectar Research Cloud.
Explore the resources🔗 bit.ly/ardc-people-...
#TipTuesday

11 months ago 2 1 0 0
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Neurodesk now integrates with Siemens OpenRecon :) Bring your image processing pipeline to the MRI scanner and accelerate clinical translation. This will be presented at ISMRM 2025 on Monday, 12th of May, 10am at the Siemens Booth, 4pm at poster 1962 and at the MAGNETOM User Meeting.

11 months ago 15 3 0 2

OHBM Brainhack 2025 – Register today! Exactly three months from now, we at OSSIG will bring you the OHBM Brainhack, and this time we will be joined by the @neurodesk.bsky.social and the Neuroimaging Statistics Workshops ! 🙂🧠 @ohbmofficial.bsky.social

1 year ago 10 8 1 0
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Check out the schedule of events linked with OHBM 2025
- Brain connectivity workshop, June 20-22
- Hackathon, June 21-23
- Neurodesk, June 21
- Brain gradients, June 23
- Precision network therapeutics, June 29
Register now!
We look forward to welcoming you to Brisbane!
@ohbmofficial.bsky.social

1 year ago 31 20 0 1
MRITogether2024-S3T3: Development journey of the Neurodesk platform
MRITogether2024-S3T3: Development journey of the Neurodesk platform YouTube video by ESMRMB

The MRItogether 2024 videos are online :)

1. Neurodesk's development journey and lessons learned: www.youtube.com/watch?v=KJh_...

2. Neurodesk overview and live demo: www.youtube.com/watch?v=B7Gm...

3. how data can be converted into BIDS using Neurodesk: www.youtube.com/watch?v=uXrg...

1 year ago 9 5 0 0
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We have a fully funded PhD position available, application deadline is 8th Jan 2025: study.uq.edu.au/study-option...

This project will develop methodologies and standards for defining reproducible, benchmarked analysis pipelines and integrating them in Neurodesk.org and Brainlife.io

1 year ago 6 3 0 0
Neurodesk Neurodesk

The latest episode of Andy Jahn's BrainCast covers how www.Neurodesk.org was developed, how it is currently used, and what its prospects are for making neuroimaging data analysis more accessible and reproducible. YouTube: www.youtube.com/watch?v=U_6_... Spotify: open.spotify.com/episode/57vT...

1 year ago 8 0 0 0
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MRI together is on this week - December 3-6 2024 - A Global workshop on open, reproducible, and inclusive MR research! Registration: www.eventbrite.co.uk/e/mri-togeth... There will be 3 talks about Neurodesk on Wednesday and Thursday by Aswin Narayanan,
@sbollmann.bsky.social and Thuy Dao

1 year ago 7 3 0 0

Let's create an #MRI researcher starter pack! There are a couple that are neuroimaging-based, but not really the method development community. I started putting together a few profiles, but please spread the word and tell me who else to add. If there is already one, let me know! go.bsky.app/EVqd6pe

1 year ago 55 22 22 1
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Collinearity...is orthogonalization the answer? (No) If I had a dollar for every time I read a paper purporting to have repaired a multicollinearity issue by orthogonalizing regressors...  Unfortunately, once collinearity is there and the data have been...

Are you tempted to orthogonalize the regressors in your fMRI model? @jeanette-mumford.bsky.social tells you why this is almost never a good idea, and is likely to wreck the interpretation of your model. mumfordbrainstats.tumblr.com/post/1337933...

1 year ago 128 35 5 1

Time to follow @ohbmofficial.bsky.social on BlueSky, you brain mappers. 🧠

bsky.app/profile/ohbm...

1 year ago 23 15 0 0
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Very lucky to hear that our 3-year ARC Discovery Project "Towards Standards and Benchmarks for Reproducible Neuroimaging Research" was funded :) Planned outcomes include implementing and integrating processing standards with neuroimaging platforms like Neurodesk.org and Brainlife.io

1 year ago 13 1 2 0
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#MRITogether is around the corner, and here is more about our first 2 sessions 😍

Come join us and register here: mritogether.esmrmb.org/24m/registra...

1 year ago 9 5 0 0
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#MRITogether Day 2 (2/2) program is also full of excellent speakers, including my new supervisor @martinhebart.bsky.social 😆
Please join us in this free, fantastic event! Even if it is just to attend a session, make sure you register to access our webinar: mritogether.esmrmb.org/24m/registra...

1 year ago 15 11 0 3

We created a #neuroinformagical (obvs) starter pack! Let us know who else to add!
#openscience #datasharing #neuroskyence 🧪

go.bsky.app/LRqnaMP

1 year ago 50 23 15 4
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#MRITogether Day 2 (1/2) program is now out! There are so many amazing talks, but I'm especially looking forward to hearing more about transferable skills and career transitions from these amazing speakers!

Register here: mritogether.esmrmb.org/24m/registra...

1 year ago 12 6 0 2
Neurodesk Neurodesk

Just start doing some real tasks with Neurodesk @neurodesk.bsky.social .
It's really amazing (at least far better than having dual boot if you are using Windows).
Check out if you are working with neuroimaging packages.

www.neurodesk.org

1 year ago 1 1 1 0
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✨We are thrilled to announce the upcoming launch of a brand-new OHBM online satellite meeting, co-organized by the Sustainability and Environment Action Special Interest Group (SEA-SIG) and OHBM.✨

Mark your calendars: September 2025! 🌱🌍

1 year ago 16 9 1 2

Updated -largely no exhaustive- list : go.bsky.app/R8RNJgc
Please reply to be added.

1 year ago 82 33 64 2

We're excited to release new versions of our BIDS-Apps for processing and analyzing #dmri data, QSIPrep and QSIRecon! Our team has been working hard to prepare these pipelines to process infant data and bring them in line with the @nipreps.bsky.social ecosystem. #neuroimaging #nipreps #bids 1/10

1 year ago 39 24 1 2