#AGTA17

Clare Puttick and @Psy_Fer_ from @kinghorngenomes received awards at #AGTA17 x.com/martinalexsmith/status/9...

3/4 of the #AGTA17 talk and poster prizes awarded to @GarvanInstitute students and ECRs @si_hardwick @MarkPinese and Claire Puttick

Here is the resource @seangrimmond mentions #AGTA17 http://docs.icgc.org/pcawg/

FunSeq2: a framework for prioritizing noncoding regulator... Identification of noncoding drivers from thousands of som...

FunSeq2: a framework for prioritizing noncoding regulatory variants in cancer genomebiology.biomedcentral.com/articles/10.1186/s13059-... #agta17

Last #agta17 speaker @seangrimmond: Median prognosis for pancreatic cancer patients is only a few months

EC: @bionanogenomics Saphyr tech stretches fluorescently tagged/nicked DNA through nanochannels to take Matrix-like photographs #AGTA17

Heatmap AND tSNE on the same slide #confbingo #AGTA17

PDX= patient derived xenografts for the non-cancer experts. Basically growing a human tumour in a mouse #agta17

FTFY @AliciaOshlack @JosephPowell_UQ #agta17

I hope @AliciaOshlack has Joseph-plotted her scRNAseq data... #AGTA17

Joseph-plots™️: an original alternative for those who cannot deal with anymore #t-SNE plots @JosephPowell_UQ #AGTA17

@JosephPowell_UQ identifying individuals from multiplexed single cell RNAseq data #agta17

@si_hardwick demonstrating how we used RNA sequins to benchmark SCuigglePlex on nanopore RNAseq data #AGTA17

Sequins designed to reproduce as many biological transcriptome features without mapping to a reference species @si_hardwick #AGTA17

@si_hardwick talking about RNA sequins, the sexyest synthetic spike in standards for benchmarking #RNAseq @sequ_in #AGTA17

Propr package here:
cran.r-project.org/web/packages/propr/index... #agta17

Thom Quinn from Deakin Uni talking about treating RNAseq as relative data to avoid normalization #AGTA17

Dr Pauline Ng scraping the depths of @WebMD drug reviews to identify compatible and compare alternative drugs #AGTA17

These BGI sequencers look like they are out od the Matrix, ready for world domination! #AGTA17 @BGI_Events

scCATseq... should have thought that name throught a bit more #agta17

Action shot of Claire Puttick presenting her work on detecting stretches of homozygosity in clinical genomes #AGTA17 @kinghorngenomes

The enigmatic @Psy_Fer_ from our group presenting SCwigglePlex at #AGTA17 ; owning his first poster presentation! @kinghorngenomes

1m poster pitch by @GammyAL on #RAGEseq. Had 20s left to kill--like a boss!! #AGTA17

@mccabe_mj and Claire Puttick from @kinghorngenomes postering it up at #AGTA17

1m rapid poster pitches. @iradeveson on reversing sequences for spike in standards @sequ_in #AGTA17

Fellow nanoporian @DevikaGanes from the group of @lachlancoin talking about repeat genotyping with @nanopore sequencing #AGTA17

It also 'sequences' RNA directly--correlates with cDNA #AGTA17

First time I see a 3D Manhattan plot. 319 lipids species vs variant frequencies in cohort @nickomatics #AGTA17

Sydney Genomics Collaborative Sydney Genomics Collaborative

Here is the amazing #MGRB website @MarkPinese is talking about #AGTA17 https://sgc.garvan.org.au/initiatives/mgrb

VH: Hunter-gatherer Khoesan clans have higher genetic diversity than agrarian clans #AGTA17