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Posts by Misha Paauw

Excited to share our new paper out today in @science.org 🎉

We show that HGT via natural competence drives diversification of chromosomal integrons in V. cholerae 🤩

Below a 🧵 on key findings incl. background on natural competence in V. cholerae 1/
#microsky #phagesky
www.science.org/doi/10.1126/...

1 week ago 212 85 11 2

A recipient-based anti-conjugation factor triggers an abortive mechanism by targeting the Type IV secretion system www.biorxiv.org/content/10.64898/2026.03...

1 month ago 13 4 0 0
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Convergent evolution of hexenal isomerases in Lepidoptera and plants - Nature Ecology & Evolution Phylogenetic and functional analyses across 34 Lepidoptera and 183 plant species show that hexenal isomerases found in Lepidoptera exhibit functional convergence with those found in plants despite hav...

Phylogenetic and functional analyses across 34 Lepidoptera and 183 plant species show that hexenal isomerases found in Lepidoptera exhibit functional convergence with those found in plants despite having evolved independently from unrelated enzyme families 🧪 www.nature.com/articles/s41...

1 month ago 20 13 0 1
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Independent, ongoing clade-specific expansions of IS5 elements in Pseudomonas syringae Insertion sequence (IS) elements are transposable regions of DNA present in a majority of bacterial genomes. It is hypothesized that differences in distributions of IS elements across bacterial strain...

Hey y’all,

New paper out from the lab in Microbial Genomics, starting down the rabbit hole of IS elements in Paeudomonas syringae

www.microbiologyresearch.org/content/jour...

2 months ago 52 23 2 0
Vacancy — PhD position in Deciphering the Cellular and Molecular Basis of Signal Integration in Plants <p><span>Do you wonder how plants simultaneously process, weigh and interpret the countless signals form their surroundings? Are you interested in delving into the mechanisms of signal integration in plants on a cellular level and have a passion for </span><strong><span>molecular biology and bio-imaging</span></strong><span>? Then this job may be for you! We are seeking a dedicated PhD-candidate to join our ambitious but collaborative team. </span></p>

We are hiring! There is a PhD-position available in my group on environmental signal integration in plants. @swammerdamuva.bsky.social
More information:
werkenbij.uva.nl/en/vacancies...

4 months ago 13 19 0 1
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Hydathodes at the forefront of plant immunity against vascular pathogens Hydathodes are tiny plant organs that form an interface between the leaf surface and xylem vasculature. They facilitate excretion of xylem fluid under…

We wrote a review 📖 on hydathode immunity! Learn how bacteria exploit hydathodes to access the vasculature and open questions for future research.

📣 If you are curious about this topic, please consider applying for two open positions in my lab (until Nov23)! www.sciencedirect.com/science/arti...

5 months ago 20 13 0 0

Nice detective work on spotting this! A little worrying that this could go wrong in the first place. What about other barcoding kits such as NBD114?

5 months ago 3 0 1 0

Wonderful workshop! Very inspiring for my dashboard idea.

7 months ago 1 0 1 0
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🌎👩‍🔬 For 15+ years biology has accumulated petabytes (million gigabytes) of🧬DNA sequencing data🧬 from the far reaches of our planet.🦠🍄🌵

Logan now democratizes efficient access to the world’s most comprehensive genetics dataset. Free and open.

doi.org/10.1101/2024...

7 months ago 218 118 3 16

Finally a method to identify plant RNA-binding proteins! 🧬 This enables so much new biology to discover from immunity to development! 🤯 🪴 Established by the incredible Victor Sanchez with @havandenburg.bsky.social @uva.nl Congratulations!!

8 months ago 19 9 0 1

New paper from my PhD lab, continuing the work on plant immunity in hydathodes against Xanthomonas campestris.

9 months ago 1 0 0 0

Happy to share our most recent paper on the evolution of Xcc!

1 year ago 1 0 0 0

Indeed! This is certainly an interesting parallel, the paper appeared just a bit too late to include it in our discussion. Together with reports of some human pathogens, this warrants further investigation.

1 year ago 0 0 1 0