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Posts by Denny Popp

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Excited to attend #eshg2025 in vibrant #Milano and present latest results - poster is already mounted. Looking forward to inspiring talks and discussions as well as gelato.

10 months ago 2 0 0 0

We solved a puzzling case of Incontinentia Pigmenti by phasing a pathogenic variant in IKBKG to the preferentially inactivated X chromosome and at the same time discriminating gene from pseudogene using #Nanopore long reads.
#HumanGenetics #IncontinentiaPigmenti #XInactivation #LongReads

1 year ago 0 0 0 1
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Incorporating Nanopore Sequencing Into a Diverse Diagnostic Toolkit for Incontinentia Pigmenti Incontinentia pigmenti (IP) is a rare hereditary disorder affecting 1.2 in 100,000 live births, predominantly females. Genetic analysis of IP is complicated by a homologous pseudogene, making convent...

Quite excited to share our latest publication: Incorporating #Nanopore Sequencing Into a Diverse Diagnostic Toolkit for Incontinentia Pigmenti
onlinelibrary.wiley.com/doi/full/10....

1 year ago 0 0 1 0

May I join please?

1 year ago 0 0 1 0
awesome-genome-visualization

Here is a great summary of genomic visualization tools: cmdcolin.github.io/awesome-geno...

1 year ago 34 15 3 2
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Bluesky for Science Bluesky starter packs for genomics, bioinformatics, R, and Nextflow

Bluesky for Science

Starter packs for genomics, bioinformatics, #Rstats, Nextflow. Moderation lists. Feeds. Let's rebuild the old scitwitter community and keep this place nice

blog.stephenturner.us/p/bluesky-fo... 🧬🖥️🧪

1 year ago 182 68 35 12

BlueSky: A Guide for Scientists by @jacoates.bsky.social

#AcademicSky #EduSky 🧪

1 year ago 144 75 7 5
Evaluation of Automated Magnetic Bead–Based DNA Extraction for Detection of Short Tandem Repeat Expansions With Nanopore Sequencing This study may help other laboratories to evaluate their DNA extraction method regarding the suitability for detecting repeat expansions with nanopore sequencing. We evaluated an automated magnetic b....

Hot off the press: Evaluation of Automated Magnetic Bead–Based DNA Extraction for Detection of Short Tandem Repeat Expansions With Nanopore Sequencing - Journal of Clinical Laboratory Analysis onlinelibrary.wiley.com/doi/10.1002/... #RepeatExpansion #Nanopore #Genomics #DNA

2 years ago 3 0 0 0