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Posts by Valentyn Bezshapkin 🇺🇦

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Scikit-bio: a fundamental Python library for biological omic data analysis - Nature Methods Nature Methods - Scikit-bio: a fundamental Python library for biological omic data analysis

The scikit-bio paper in online in Nature Methods! Many thanks to our collaborators, community contributors and reviewers! We couldn’t have done it without you. www.nature.com/articles/s41... #Bioinformatics #OpenSource

4 months ago 97 51 3 0

The man
The legend

8 months ago 0 0 0 0

My question is:
How come we designed a system everyone currently tries to avoid with all possible shortcuts?

8 months ago 0 0 1 0
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✔️The programme for the #bc2basel tutorials & workshops is out! From #geneexpression analysis to #machinelearning or #datavisualization, beginner or advanced: boost your #bioinformatics skills!

👉 Register to make sure to secure your spot (limited seats): bc2.ch/registration...

1 year ago 17 11 1 0

You actually do, there's comp bio

8 months ago 0 0 1 0

Amazing, congratulations!

8 months ago 0 0 0 0
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Very honored to receive the 2025 ISCB Innovator Award at #ISMBECCB2025 and present our lab’s journey—from mapping cells to modeling their future.

Thanks to my amazing team and collaborators—this is our award! 🙌

📽️ Keynote: Atlases, AI & virtual cells
📝 doi.org/10.1093/bioi...

8 months ago 56 5 5 1
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The eagle has landed at #ISMBECCB2025 🦅

Interested in phages, metagenomics and protein language models?

Catch me on 24th July, poster session D (D-295).

See you on coffee breaks! ☕

9 months ago 5 0 1 0

Congratulations @maksymuki.bsky.social and all the people involved.

Very cool work! As a passionate photographer, would be cool to see new sensors in practice 📸

10 months ago 4 0 0 0
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I'm joining them!

10 months ago 1 0 0 0
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Pfizer Research Prize I Home Outstanding Medical Research and Digital Innovation can receive the Pfizer Research Prize. Find out more here.

Hello fellow Swiss scientists! 🇨🇭

An exciting opportunity from Pfizer Foundation:
Got a project in immunology, oncology, or digital health? You could win CHF 20,000 in funding.

DL: 31.07.2025
Apply here 👉 www.pfizerresearchprize.ch

#ScienceFunding #Immunology #Oncology #DigitalHealth #Switzerland

10 months ago 0 0 0 0
Novonesis Biotechnology Prize 2025
Novonesis Biotechnology Prize 2025 YouTube video by Novo Nordisk Foundation

For her innovative research on plant microbiomes paving the way for healthier crops and higher yields Julia Vorholt was awarded the Novonesis Biotechnology Prize 2025. Watch the video of the @novo-nordisk.bsky.social on Julia Vorholt's career and research: www.youtube.com/watch?v=LoXj...

11 months ago 4 2 0 0

Congratulations to the whole team!
It is a great tool.

11 months ago 0 0 0 0

Waiting on my UK visa decision. Hopefully, see you there! 🤠

11 months ago 2 0 0 0

Me and @rafalmostowy.bsky.social confirm: we liked it!

11 months ago 1 0 0 0
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Had a great fun at @rdrpsummit.bsky.social!

The field of RNA virus discovery is gaining momentum and this community is in the forefront.
New ideas and collaborative projects begin here, usually from a friendly conversation :)

11 months ago 3 2 0 0
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It would be useful to share evidence instead of rage baiting people.

11 months ago 0 0 0 0

That's what one can expect from people who tried to befriend putin, who did same to thousands of children.

11 months ago 1 0 0 0

What's the context here?

1 year ago 0 0 1 0

Only 2 months to dismantle american national freedom myth.

1 year ago 1 0 0 0

I'll book my SBB tickets

1 year ago 0 0 0 0

Realistically, Zelenskyy doesn't have any opponents, even if they will have support.
He is a juggernaut and he would have won evelections if they happened. That coming from me, a great sceptic of Zelenskyy becoming a president in 2019.

1 year ago 1 0 0 0

Yep, I guess freedom loving Americans turned out to be as cowardly as russians under regime pressure.
Good game, well played.

1 year ago 1 0 0 0

Congratulations!!!

1 year ago 2 0 0 0
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Doechii is goated!
Her Tiny Desk live is among the best ones from series.

1 year ago 0 0 0 0

I'm sorry.
We're hanging here, a lot of humanitarian organisations left without grants, external policy is unclear.
It might be the dawn, but we'll only learn when it's too late.

1 year ago 1 0 1 0

Very cool!
I tried to do it once, but bwa code was not the easiest to bind :(
Kudos!

1 year ago 1 0 1 0

Fully adapted Obsidian and it does wonders for me. Graph tracing allows me to connect topics like never before.

1 year ago 4 0 1 0

I would say it's a problem with communication and delivery as well.
The research should be digested and adequately prepared for public and their level of expertise.

2 years ago 1 0 0 0

Is there any good review on our current understanding of consciousness or theories explaining it?

2 years ago 1 0 1 0