DeeDeeExperiment: Building an infrastructure for integrating and managing omics data analysis results in R/Bioconductor AbstractSummary. Modern omics experiments now involve multiple conditions and complex designs, producing an increasingly large set of differential expressi

From @guigadraws.bsky.social & colleagues in #OUP 's #Bioinformatics journal | DeeDeeExperiment: Building an infrastructure for integrating and managing omics data analysis results in R/Bioconductor | #RStats #Bioconductor #Bioinformatics #OpenScience | 🧬 🖥️ 🧪🔓
⬇️
academic.oup.com/bioinformati...

#biodiversity #bioinformatics Summer School .. 21-26 June in Siegen, Germany co-organised by @sib.swiss & @denbi.bsky.social
www.sib.swiss/training/cou...
🟢 eDNA & ecosystems
🟣 pangenome diversity
🔵 population genetics
🟡 comparative genomics
Register now, we are reviewing applications already!

A new study by Runfeng Lin & Sebastian Ahnerton from Cambridge University on the application of Circuit Topology in Protein Science:

"Millisecond Prediction of Protein Contact Maps from Amino Acid Sequences"
www.biorxiv.org/content/10.6...

#ChemSky #Topology #StructuralBiology #Bioinformatics

What are your go-to resources for scientific visualization? Do you have a favorite chart type that everyone else seems to hate? (I’m looking at you, pie charts... 🥧)

#Bioinformatics #OpenScience #DataViz #ScientificCommunication [5/5]

As usual, we've had a great time presenting our projects at the 7th Central German Meeting on #Bioinformatics - Mittelerde Meeting 2026 at @unihalle.bsky.social! 🧬⚕️🦠🌡️🔧🖥️
Thanks to the organizers and sponsors!
#epigenomics #diagnostics #methylation #ncRNA #adaption #Sugar #DataEngineering #metadata

These are the hashes i follow: Collection of hashes that are important for the areas that i work
#chemsky #compchem #cheminformatics #machinelearning #drugdiscovery #bioinformatics #deeplearning #neuralnetwork #networks #biological #DeepLearning #ML #LargeLanguageModels #ML #MachineLearning

Plant genome sequence assembly and annotation workflow. Figure source: https://doi.org/10.1186/s12864-026-12623-z

Interested in the genetic secrets of your favorite plant?

A genome sequence might reveal them. We wrote down a workflow from DNA extraction & sequencing to genome sequence assembly & annotation. It includes a hands-on guide with example commands.

doi.org/10.1186/s128...

#Genomics #Bioinformatics

A Strategic Partnership to Advance AI Applications in Genomics and Bioinformatics for Health Innovation Background: Late 2025, JMIR Bioinformatics and Biotechnology (JBB) is pleased to announce a new strategic partnership with the MidSouth Computational Biology and Bioinformatics Society (MCBIOS), under which JBB will serve as the official journal of MCBIOS. This collaboration represents a shared commitment to advancing computational biology, bioinformatics, and biotechnology through open science, interdisciplinary collaboration, and real-world impact. At a time when biological discovery and health innovation are increasingly driven by large-scale data, artificial intelligence (AI), and computational methodologies, this partnership reflects a shared vision: to bridge bioinformatics, data science, AI, and innovation to transform health. Together, JBB and MCBIOS aim to provide a scholarly home for research that not only advances methods and technologies, but also demonstrates meaningful applications across biomedical, clinical, and population health contexts. Objective: N/A Methods: N/A Results: N/A Conclusions: N/A

A Strategic Partnership to Advance AI Applications in Genomics and Bioinformatics for Health Innovation #AI #Bioinformatics #ComputationalBiology #HealthInnovation #Genomics

Explore more DO-powered research at github.com/DiseaseOntol...

#DiseaseResearch #Biocuration #Bioinformatics #FAIR #ComputationalBiology

Unit 5 – Biological Database Management (804) (IMSC BIOINFORMATICS) Full Notes This module introduces key concepts in bioinformatics, focusing on Multiple Sequence Alignment (MSA) and Expressed Sequence Tags (ESTs). You will learn how biological sequences are aligned to identify conserved regions, infer evolutionary relationships, and predict structure and function. The content also covers major MSA methods, tools like ClustalW and T-Coffee, and explains how ESTs are generated and used for gene discovery, genome annotation, and functional genomics.

Learn MSA methods, tools like ClustalW, T-Coffee, and ESTs for gene discovery, alignment, and bioinformatics analysis. #rathbiotaclan #studentportal #bioinformatics #MultipleSequenceAlignment #EST

Unit 4 – Biological Database Management (804) (IMSC BIOINFORMATICS) Full Notes This module introduces the core concepts of sequence alignment and its central role in bioinformatics. You will learn how DNA, RNA, and protein sequences are compared to identify similarities, conserved regions, and evolutionary relationships. The content explores different types of alignments, scoring matrices such as PAM and BLOSUM, and widely used tools like BLAST and FASTA. It also covers advanced algorithms including Smith–Waterman and PSI-BLAST, along with concepts like PSSM, helping you understand how sequence analysis supports functional prediction, evolutionary studies, and modern biological research.

Learn sequence alignment, BLAST, FASTA, PAM, BLOSUM, and scoring matrices with applications in bioinformatics. #studentportal #rathbiotaclan #bioinformatics

Unit 1 – Biological Database Management (804) (IMSC BIOINFORMATICS) Full Notes What is database model ? Describe various data model and explain the detail about object oriented relational data model. What is SQL ? Write down about the Data Definition Language. What is DBMS ? How to interact with the DBMS ? Explain in detail SQL statements for creating a table, joining two tables, insert data into the table, updating data in a table.

Full Detailed Notes On Unit 1 - Biological Database Management (804) (IMSC BIOINFORMATICS) Full Notes #rathbiotaclan #studentportal #database #bioinformatics

Punctual for the Friday wrap-up: The #BioFabric session is live! 🚀

We get straight into the logic and code to turn network "hairballs" into structured, readable data.

Watch the full session: www.youtube.com/watch?v=Dk0o...

#DataViz #Bioinformatics

💡Working with #biomarkers in your research?
Fios Genomics can help! We support pharma, biotech, CROs & academia with discovery, validation, signature ID & stratification—accelerating innovation & improving outcomes.
Learn more: https://www.fiosgenomics.com/biomarker-services
#bioinformatics

Custom dictionary support is available in the PDBe mmCIF validator:

VS Code: set dictionary path in settings

Python script: pass dictionary path via CLI

#mmCIF #PDB #Bioinformatics #StructuralBiology

Band gap energy shift as a biophysical marker of Puerarin’s neuroprotective role in epilepsy-induced demyelination royalsocietypublishing.org/rsif/article... | #JRSocInterface #Biochemistry #Bioinformatics #ChemicalBiology

MetaPepticon: automated prediction of anticancer peptides from microbial genomes and metagenomes Background Anticancer peptides (ACPs) are increasingly recognized as promising therapeutic candidates due to their ability to selectively target cancer cells. However, the systematic discovery of nove...

Our article has been published today in @PeerJSTM peerj.com/articles/20990 #Bioinformatics #EcosystemScience #Microbiology #Oncology

Multi-omics is evolving fast, but not without controversy.
Headlines often focus on the challenges rather than the potential.
We break down what #multi-omics really is, where it adds value, and how to use it effectively:
https://www.fiosgenomics.com/what-is-multi-omics-really
#bioinformatics

Dreaming of a career in cancer research?
Join the International PhD Program at DKFZ - Germany’s largest biomedical research center.
Explore #cancerresearch including #cancerbiology, #bioinformatics, #epidemiology & #medicalphysics.
The Summer Selection is open now 👉 apply here: t1p.de/hl56b

Can DNA reveal where someone has been?
Eran Elhaik (Lund University) develops AI-based methods combining genetic and microbial data to link people to specific environments, adding a new dimension to forensic analysis.
🔗 www.biologi.lu.se/artikel/ny-d...
#Forensics #Genetics #Bioinformatics #AI

Happy Sri Rama Navami from BioResire! 🌺
Empowering life science careers with real skills in your virtual lab.
Join students: whatsapp.com/channel/0029...

#RamaNavami #HappyRamaNavami #SriRamaNavami #BioResire #RamaNavami2026 #LifeScienceCareers #Bioinformatics #VirtualLab #BiotechTraining

Excited to welcome Dr Kiel Hards to our next #eDNA Community Meeting!

They’ll be presenting: "Streamlining the upload of biodiversity data to global repositories with eDNAbridge."

🗓️ 1 April 2026. All welcome!

Agenda & join link: buff.ly/etOkvhx

#Bioinformatics

Privacy and Security Throughout the Health Data Life Cycle: From Primary Care to Research Networks Health data are increasingly generated, shared, and analyzed across an ever-growing collection of settings. While these developments enable new forms of biomedical discovery and clinical decision supp...

Privacy & Security Throughout the Health Data Life Cycle: From Primary Care to Research Networks www.annualreviews.org/content/jour... #healthcare #bioinformatics #data #privacy #security

Vibe Coding Comes to Omics How Jesse Meyer built a fully functional proteomics data analysis application in under 10 minutes, using four prompts, no handwritten code, and under $2

Vibe Coding Comes to Omics - How @j-my-sci.bsky.social from @cedarssinaihsu.bsky.social built a #proteomics data analysis application in under 10 minutes, using four prompts, no handwritten code, & under $2 www.theanalyticalscientist.com/issues/2026/... #coding #vibecoding #bioinformatics

Please share: COME JOIN MY LAB! 🔬 (Link below)

Fully funded PhD scholarship in my #bioinformatics group at DTU Health Tech in the intersection of #dataScience, #machineLearning, #immunology & translational medicine

Link: efzu.fa.em2.oraclecloud.com/hcmUI/Candid...

My lab: immunomicslab.github.io

preprint: biorxiv.org/content/10.6...

code: github.com/zhengxinchan...

#Genomics #Bioinformatics #LongRead #RNAseq #population_scale #Isoform

Me winning the hackathon! 💻 #FIRSTprize 🥇 #hackathon #dragonyear #bioinformatics #komljenovicno1 #andrea

Interested in transcriptome analysis?

Our case study features transcriptome analysis of antigen-specific Tᵉᶠᶠ responses.

See what we found out! 👀
www.fiosgenomics.com/transcriptome-analysis-o...
#transcriptomics #bioinformatics

Our Harpy paper is now published in Bioinformatics 🎉

Harpy is a scalable spatial omics analysis library built with Saeyslab & VIB Spatial Catalyst, integrating with SpatialData, AnnData, Scanpy, and Squidpy.

Check it out! 👇

academic.oup.com/bioinformati...

#SpatialOmics #Bioinformatics

New course dates screenshot which can be found at link in post

Hooray! We have scheduled new dates for upcoming courses in #bioinformatics #DataAnalysis #Statistics #Python #R #Programming #NGS and more!
biotrain.tv