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Posts by Fernando Villanea

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I am hiring a popgen postdoc!

Looking for a creative scientist to join us at USC to investigate recessive variation and complex traits in model or non-model species. The project is funded by a multi-year NIH grant, contract can be renewed.

Job add & details 👇🏽

usccareers.usc.edu/job/los-ange...

13 hours ago 49 69 0 1
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Pressure-tolerant Evolution in Rhodopsin of Deep-diving Whales Abstract. Life in the deep sea presents extreme challenges to protein structure and function, with hydrostatic pressure serving as a significant source of

Hayate Takeuchi and Takashi Hayakawa investigated rhodopsin structural evolution in deep-diving whales, showing that rhodopsins have evolved for both spectral sensitivity and structural resilience under extreme hydrostatic pressure.

🔗 doi.org/10.1093/gbe/...

#genome #evolution

18 hours ago 8 3 0 0

I truly feel for all the future PI’s who won’t have this resource. How much talent is going to go unfunded.

1 day ago 3 1 0 0
Science | AAAS

Feels like this paper on protein-templated DNA synthesis by a natural enzyme warrants some comment.
So here's a 🧵. /1
www.science.org/doi/10.1126/...

3 days ago 181 79 7 8
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AAAG Past President @amylnon.bsky.social is hosting a FREE workshop on Epigenetics for Anthropologists 🧬 at the University of California San Diego from August 17 - 21, 2026. Applications are due May 4, 2026 🗓️. Click on link👇🏾 for details docs.google.com/document/d/1...

3 days ago 3 3 0 0

re the newly published paper on signals of positive selection in Eurasian genomes through time.

4 days ago 4 1 0 0

On a deeper level there’s a disconnect, in that the GWAS hits on which they base their calibration have tiny effect sizes, in contrast to the large selection coefficients estimated here. 14/

1 year ago 2 2 1 1

Reposting this old thread on the "Pervasive findings of directional selection" from ancient DNA. While the authors extended their results in various ways, I think many of these points still stand.

4 days ago 56 27 4 1
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Screenshot of a PDF of the published article. Title: "The tie that binds us? Challenging the primacy of DNA in kinship studies and re-centring community in defining human connections across time"

Screenshot of a PDF of the published article. Title: "The tie that binds us? Challenging the primacy of DNA in kinship studies and re-centring community in defining human connections across time"

DNA is not the same as kinship.

Our perspective paper argues that treating genetics as the ultimate proof of identity or family can:

• erase community-defined relationships
• reinforce Western biases
• and even cause real harm in policy + research

Special Issue: www.cambridge.org/core/journal...

4 days ago 112 41 5 5

😊 🥂👩🏻‍🔬

6 days ago 15 3 2 0

Great example of genetic data in PCA space mirroring geography - this time in Scandinavian lemmings!

6 days ago 19 4 1 1
Apply - Interfolio {{$ctrl.$state.data.pageTitle}} - Apply - Interfolio

Spread the word! UChicago BSD is currently searching for an instructional professor (open rank) to help develop and support graduate training in quantitative biology at UChicago. This is an Instructional Professor position (open rank). apply.interfolio.com/183517.

1 week ago 24 39 2 1
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a cartoon drawing of a monster with the number 1 on its chest ALT: a cartoon drawing of a monster with the number 1 on its chest

I came here to say exactly that!

1 week ago 1 0 0 0

The Carls are all the bats. I don’t remember why year of MMM we collectively decided every bat is called Carl.

1 week ago 0 0 1 0

Honey Badger Don’t Care HBDC

1 week ago 0 0 1 0

“I don't know whether to be proud or concerned.” fits like a glove too 😭

2 weeks ago 0 0 0 0
Directorate for Social, Behavioral, and Economic Sciences. In FY 2027, NSF will close-out this directorate. Continuing grants that align with Administration priorities, such as in behavioral and cognitive science, and all impacted employees will be transferred to other parts of the agency. The National Center for Science and Engineering Statistics will operate independently of the directorates and continue to be supported through the R&RA appropriation.

Directorate for Social, Behavioral, and Economic Sciences. In FY 2027, NSF will close-out this directorate. Continuing grants that align with Administration priorities, such as in behavioral and cognitive science, and all impacted employees will be transferred to other parts of the agency. The National Center for Science and Engineering Statistics will operate independently of the directorates and continue to be supported through the R&RA appropriation.

Once again it is time to contract your representatives: The FY27 budget request for NSF (see nsf-gov-resources.nsf.gov/files/FY-202...) would get rid of the Directorate for Social, Behavioral and Economic Sciences.

2 weeks ago 27 23 3 2
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A few years ago, using palaeoproteomics, we identified a tiny hominin bone from Denisova Cave and named it Denisova 17 (D17).

A rather unremarkable sliver.

At the time, I wondered, could it be Denny’s sibling (the Neanderthal/Denisovan hybrid we had just reported)?

Well, turns out: no. 🧵1/4

2 weeks ago 57 22 3 0
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Huh. This is my first time picking a champion. It feels odd #2026MMM

2 weeks ago 5 0 1 0
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4MadStoats Shop | Redbubble 4MadStoats is an independent artist creating amazing designs for great products such as t-shirts, stickers, posters, and phone cases.

The art team experienced some technical difficulties with their online store- so they made a side store that will be operational very soon! Check them out!

Bookmark & return to show the artists your love & appreciation for #2026MMM www.redbubble.com/people/4MadS...

2 weeks ago 21 5 0 2

Next year I go big on reptiles

2 weeks ago 0 0 0 0
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#2026MMM #Champion #MoneyDivision #TeamHumpbackWhale Art by Olivia Pellicer @opellisms.bsky.social ,Valeria Pellicer @veppart.bsky.social , Mary C. Freisner @maryfreisner.bsky.social ,and Charon Henning @oddangel.bsky.social

2 weeks ago 40 10 3 1
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MAMA HUMPBACK WHALE DEFEATS NILE CROCODILE!

HUMPBACK WHALE is #2026MMM CHAMPION!

Artwork by @veppart.bsky.social & @opellisms.bsky.social !!!

2 weeks ago 118 34 22 20

No No

2 weeks ago 2 0 0 0
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a bunch of mushrooms are growing on a rock with the words " there 's fungus among us " ALT: a bunch of mushrooms are growing on a rock with the words " there 's fungus among us "
2 weeks ago 6 0 0 0

No

2 weeks ago 1 0 0 0

Also crocodiles are salt water tolerant! It'll be fiiiiine

2 weeks ago 2 0 1 0

Haha no. @mammalssuck.bsky.social it's like the Terminator when it comes to MMM. No emotion. No mercy.

2 weeks ago 1 0 0 0

and an Orca is basically a BW crocodile so advantages in fighting off predatory crocodile really

2 weeks ago 1 0 0 0
A Representative ideograms of three main karyotypes (2n = 30/32/38) observed among the true crocodile species analyzed in the present study showing Zoo-FISH results after using CSI-1, OST-1, OST-4, and OST-19 probes, and the 18S rDNA distribution. Arrows indicate the 4 main chromosomal rearrangements involved in karyotype differentiation from a putative ancestral 2n = 32. B Ancestral state reconstruction of diploid chromosome number using maximum parsimony. The phylogenetic relationships were adapted from Oaks (2011) and Colston et al. (2020), C. halli was added manually, & its position requires confirmation. Karyological data were collected from Cohen & Gans (1970), Kawagoshi et al. (2008), Hekkala et al. (2011), Srikulnath et al. (2015), Oliveira et al. (2021), Olmo and Signorino (2022), and this study (in bold). The colored circles represent different 2n, while the black diamonds indicate the species with unknown 2n. Ambiguous data (marked with an asterisk) are addressed in the “Discussion” section of the paper.

A Representative ideograms of three main karyotypes (2n = 30/32/38) observed among the true crocodile species analyzed in the present study showing Zoo-FISH results after using CSI-1, OST-1, OST-4, and OST-19 probes, and the 18S rDNA distribution. Arrows indicate the 4 main chromosomal rearrangements involved in karyotype differentiation from a putative ancestral 2n = 32. B Ancestral state reconstruction of diploid chromosome number using maximum parsimony. The phylogenetic relationships were adapted from Oaks (2011) and Colston et al. (2020), C. halli was added manually, & its position requires confirmation. Karyological data were collected from Cohen & Gans (1970), Kawagoshi et al. (2008), Hekkala et al. (2011), Srikulnath et al. (2015), Oliveira et al. (2021), Olmo and Signorino (2022), and this study (in bold). The colored circles represent different 2n, while the black diamonds indicate the species with unknown 2n. Ambiguous data (marked with an asterisk) are addressed in the “Discussion” section of the paper.

Sales‑Oliveira et al. (2023) found that croc chromosomes are conservative maintaining similar karyotype structures & diploid chrom numbers for ~100 MY! Most Crocodylinae (including Nile Crocodile) maintain the ancestral number of 2n = 32 (16 pairs) #2026MMM doi.org/10.1007/s004...

2 weeks ago 14 5 0 0